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PLM4_65_b1_redo_sep16_scaffold_8079

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8079_1
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1142
-----------------
DNA (1140bp)
protein (380aa)
Glycosyl transferase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9W9_SINAD
glycosyl transferase family protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_8079_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1149..1691)
-----------------
DNA (543bp)
protein (181aa)
6-pyruvoyl tetrahydropterin synthase Tax=Spongiibacter tropicus RepID=UPI0003B502D7
6-pyruvoyl tetrahydropterin synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_8079_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1743..2660)
-----------------
DNA (918bp)
protein (306aa)
protein phosphatase 1 Tax=Schlesneria paludicola RepID=UPI00029A6DB2
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AGA25428.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_65_b1_redo_sep16_scaffold_8079_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(2722..3936)
-----------------
DNA (1215bp)
protein (405aa)
23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AEP12731.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEP12731.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
23S rRNA (Uracil-5-)-methyltransferase RumA Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIW3_CHLTF
PLM4_65_b1_redo_sep16_scaffold_8079_5
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

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comp(3991..4833)
-----------------
DNA (843bp)
protein (281aa)
Metallo-beta-lactamase Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B5P8_TURPD
metallo-beta-lactamase
Metallo-beta-lactamase {ECO:0000313|EMBL:AFM12605.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
PLM4_65_b1_redo_sep16_scaffold_8079_6
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(4881..5948)
-----------------
DNA (1068bp)
protein (356aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GE18_9DELT
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_8079_7
unknown

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comp(6058..6303)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8079_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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6467..7303
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036AD442
Uncharacterized protein {ECO:0000313|EMBL:KDA52877.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
von Willebrand factor, type A
PLM4_65_b1_redo_sep16_scaffold_8079_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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7376..7999
-----------------
DNA (624bp)
protein (208aa)
Outer membrane protein/peptidoglycan-associated lipoprotein Tax=Caulobacter crescentus OR37 RepID=R0CX78_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:KDA52876.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
OmpA/MotB domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_8079_10
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8600..9142)
-----------------
DNA (543bp)
protein (181aa)
Thiol:disulfide interchange protein DsbE Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8WBY0_MARHY
resA; Thiol:disulfide interchange protein DsbE
Thiol:disulfide interchange protein DsbE {ECO:0000313|EMBL:CCG94964.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus ATCC 49840.;"
PLM4_65_b1_redo_sep16_scaffold_8079_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9447..10985)
-----------------
DNA (1539bp)
protein (513aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Vitamin B12-dependent ribonucleotide reductase {ECO:0000313|EMBL:AEI66374.1}; EC=1.17.4.1 {ECO:0000313|EMBL:AEI66374.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
Vitamin B12-dependent ribonucleotide reductase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJZ8_MYXFH
Displaying 11 items

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