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PLM4_65_b1_redo_sep16_scaffold_9228

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9228_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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659..1462
-----------------
DNA (804bp)
protein (268aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NVX4_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PLM4_65_b1_redo_sep16_scaffold_9228_2
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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1459..1656
-----------------
DNA (198bp)
protein (66aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BFK9_CHLPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL65186.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
PLM4_65_b1_redo_sep16_scaffold_9228_3

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1677..2150
-----------------
DNA (474bp)
protein (158aa)
Marine sediment metagenome DNA, contig: S01H1_S11526 {ECO:0000313|EMBL:GAG00029.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWF2_Bacteroidetes_43_11 species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Putative lumazine-binding protein
PLM4_65_b1_redo_sep16_scaffold_9228_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2193..3038
-----------------
DNA (846bp)
protein (282aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Prolipoprotein diacylglyceryl transferase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D802_SINAD
prolipoprotein diacylglyceryl transferase
PLM4_65_b1_redo_sep16_scaffold_9228_5
unknown

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3157..3825
-----------------
DNA (669bp)
protein (223aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9228_6
unknown

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3822..4328
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9228_7
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4325..5803
-----------------
DNA (1479bp)
protein (493aa)
Fibronectin type III domain protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIR5_9BACT
Fibronectin type III domain protein {ECO:0000313|EMBL:EDY84905.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_9228_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6201..6446
-----------------
DNA (246bp)
protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_65_b1_redo_sep16_scaffold_9228_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6329..6910)
-----------------
DNA (582bp)
protein (194aa)
RNA polymerase sigma factor Tax=Ideonella sp. B508-1 RepID=UPI00034DDE80
RNA polymerase sigma factor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM4_65_b1_redo_sep16_scaffold_9228_10
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7173..8852
-----------------
DNA (1680bp)
protein (560aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTN5_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY15729.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_65_b1_redo_sep16_scaffold_9228_11
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9037..9501)
-----------------
DNA (465bp)
protein (155aa)
Calcium-binding EF-hand-containing protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNR1_OPITP
Calcium-binding EF-hand-containing protein {ECO:0000313|EMBL:KGQ18112.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
calcium-binding EF-hand-containing protein
PLM4_65_b1_redo_sep16_scaffold_9228_12
unknown

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comp(9791..10729)
-----------------
DNA (939bp)
protein (313aa)

This feature has no annotations

Displaying 12 items

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