ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_9550

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9550_1
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1..987)
-----------------
DNA (987bp)
protein (329aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B75193
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM4_65_b1_redo_sep16_scaffold_9550_2
unknown

Not on your lists

comp(1124..1648)
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9550_3
unknown

Not on your lists

comp(1618..1782)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9550_4
unknown

Not on your lists

comp(1980..2195)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9550_5
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2270..5125)
-----------------
DNA (2856bp)
protein (952aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B58424
Uncharacterized protein {ECO:0000313|EMBL:KGM55030.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
protein kinase
PLM4_65_b1_redo_sep16_scaffold_9550_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5122..5808)
-----------------
DNA (687bp)
protein (229aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000361D2B0
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG93514.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_9550_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5868..6473)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME53_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47277.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
PLM4_65_b1_redo_sep16_scaffold_9550_8
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6652..7011)
-----------------
DNA (360bp)
protein (120aa)
Antibiotic biosynthesis monooxygenase Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46QX2_CUPPJ
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AAZ64462.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
PLM4_65_b1_redo_sep16_scaffold_9550_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7017..7373)
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein Tax=Burkholderia sp. BT03 RepID=J3C5L5_9BURK
NIPSNAP family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
PLM4_65_b1_redo_sep16_scaffold_9550_10
Halomonas sp. KHS3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7439..8152
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized HTH-type transcriptional regulator YdfF Tax=Halomonas sp. A3H3 RepID=T2LBW4_9GAMM
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIN15287.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. KHS3.;"
ArsR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_9550_11
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8216..8863
-----------------
DNA (648bp)
protein (216aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6FYL4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM81286.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_9550_12
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

9093..9932
-----------------
DNA (840bp)
protein (280aa)
NADPH-dependent FMN reductase Tax=Gloeobacter kilaueensis JS1 RepID=U5QK46_9CYAN
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AGY59322.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
PLM4_65_b1_redo_sep16_scaffold_9550_13
unknown

Not on your lists

comp(9955..10068)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

Displaying 13 items

View Taxonomy