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PLM4_65_b1_redo_sep16_scaffold_9968

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9968_1
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3..212)
-----------------
DNA (210bp)
protein (70aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase, type I bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin11_novelCP organism_group=Unknown_CP
PLM4_65_b1_redo_sep16_scaffold_9968_2
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(209..1288)
-----------------
DNA (1080bp)
protein (360aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI1_9GAMM
Tax=RBG_16_Actinobacteria_70_17_curated
PLM4_65_b1_redo_sep16_scaffold_9968_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1407..3572
-----------------
DNA (2166bp)
protein (722aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
heavy metal translocating P-type ATPase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_9968_4
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3685..5250)
-----------------
DNA (1566bp)
protein (522aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K508_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ27985.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM4_65_b1_redo_sep16_scaffold_9968_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5449..5652
-----------------
DNA (204bp)
protein (68aa)
UPF0337 protein MM_2677 Tax=Methanosarcina mazei RepID=Y2677_METMA
Uncharacterized protein {ECO:0000313|EMBL:CDM66846.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_9968_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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5656..5937
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6CBE0_9PLAN
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_9968_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(6210..6848)
-----------------
DNA (639bp)
protein (213aa)
Two component transcriptional regulator, LuxR family bin=GWB2_Chloroflexi_54_36 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
LuxR family two component transcriptional regulator
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_9968_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(6823..8808)
-----------------
DNA (1986bp)
protein (662aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT47_RUBXD
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_9968_9
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8918..9847)
-----------------
DNA (930bp)
protein (310aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7W4_TERSS
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADV82888.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Displaying 9 items

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