ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_5203

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5203_1
bacterium UASB14, Bacteria

Not on your lists

3..812
-----------------
DNA (810bp)
protein (270aa)
Spermidine/putrescine ABC transporter, permease protein Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YI63_LYNSP
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK53896.1}; species="Bacteria.;" source="bacterium UASB14.;"
binding-protein-dependent transporter inner membrane component
PLM4_65_b1_redo_sep16_scaffold_5203_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

809..1690
-----------------
DNA (882bp)
protein (294aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI0002FE6B9A
spermidine/putrescine ABC transporter permease/spermidine/putrescine-binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5203_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

1687..2775
-----------------
DNA (1089bp)
protein (363aa)
Extracellular solute-binding protein Tax=uncultured candidate division OP1 bacterium RepID=H5STS2_9BACT
extracellular solute-binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5203_4
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2810..3601
-----------------
DNA (792bp)
protein (264aa)
Putative uncharacterized protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5W3_DESAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH84845.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
PLM4_65_b1_redo_sep16_scaffold_5203_5
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3641..5071
-----------------
DNA (1431bp)
protein (477aa)
aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Aminobutyraldehyde dehydrogenase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F004_CONWI
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:CDR17539.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
PLM4_65_b1_redo_sep16_scaffold_5203_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5324..6688)
-----------------
DNA (1365bp)
protein (455aa)
Succinate-semialdehyde dehdyrogenase Tax=Sorangium cellulosum So0157-2 RepID=S4XJM5_SORCE
succinate-semialdehyde dehdyrogenase
Succinate-semialdehyde dehdyrogenase {ECO:0000313|EMBL:AGP32716.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_65_b1_redo_sep16_scaffold_5203_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7008..7469
-----------------
DNA (462bp)
protein (154aa)
DinB family protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
DinB family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_5203_8
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(7527..8651)
-----------------
DNA (1125bp)
protein (375aa)
Saccharopine dehydrogenase Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HS96_CYAP4
saccharopine dehydrogenase
Tax=RBG_16_KB1_OP1_55_9_curated
PLM4_65_b1_redo_sep16_scaffold_5203_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8648..10024)
-----------------
DNA (1377bp)
protein (459aa)
Aminotransferase class-III Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLK9_9CHLR
Putrescine aminotransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5203_10
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10118..11602)
-----------------
DNA (1485bp)
protein (495aa)
4-aminobutyrate aminotransferase (EC:2.6.1.22)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ADG05140.1}; EC=2.6.1.22 {ECO:0000313|EMBL:ADG05140.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
4-aminobutyrate aminotransferase Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WT36_KYRT2
PLM4_65_b1_redo_sep16_scaffold_5203_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11750..12862
-----------------
DNA (1113bp)
protein (371aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Spermidine/putrescine ABC transporter ATPase subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XGD3_9BACT
spermidine/putrescine ABC transporter ATPase
PLM4_65_b1_redo_sep16_scaffold_5203_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12862..13767
-----------------
DNA (906bp)
protein (302aa)
Binding-protein-dependent transport systems inner membrane component Tax=Pedosphaera parvula Ellin514 RepID=B9XGD2_9BACT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEF60983.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
binding-protein-dependent transport system inner membrane protein
Displaying 12 items

View Taxonomy