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PLM4_65_b1_redo_sep16_scaffold_5236

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5236_1
unknown

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1..99
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5236_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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113..445
-----------------
DNA (333bp)
protein (111aa)
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Pedosphaera parvula Ellin514 RepID=B9XL35_9BACT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_5236_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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944..2305
-----------------
DNA (1362bp)
protein (454aa)
Glutamate dehydrogenase bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
NADP-dependent glutamate dehydrogenase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM4_65_b1_redo_sep16_scaffold_5236_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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2413..5370
-----------------
DNA (2958bp)
protein (986aa)
response regulator receiver protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
response regulator receiver protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5236_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5385..6797)
-----------------
DNA (1413bp)
protein (471aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A1520
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
PLM4_65_b1_redo_sep16_scaffold_5236_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7022..8629
-----------------
DNA (1608bp)
protein (536aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:KJB93852.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MFU8_9PROT
PLM4_65_b1_redo_sep16_scaffold_5236_7

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comp(8639..9130)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein Tax=Lewinella persica RepID=UPI000382CBAD
Uncharacterized protein {ECO:0000313|EMBL:KKO00831.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5236_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9187..10092)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68120.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_5236_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10204..11151
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein Tax=Asticcacaulis sp. AC460 RepID=V4NY33_9CAUL
Rhodanese-like protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_5236_10
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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11182..12087
-----------------
DNA (906bp)
protein (302aa)
Tax=CG_Delta_07
PLM4_65_b1_redo_sep16_scaffold_5236_11
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(12094..13152)
-----------------
DNA (1059bp)
protein (353aa)
Uncharacterized protein Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q115H6_TRIEI
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
PLM4_65_b1_redo_sep16_scaffold_5236_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13239..13727
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PK09_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF76846.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Displaying 12 items

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