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PLM4_65_b1_redo_sep16_scaffold_5391

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5391_1
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2..685
-----------------
DNA (684bp)
protein (228aa)
VBCS repeat-containing protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2W2_ISOPI
VBCS repeat-containing protein
VBCS repeat-containing protein {ECO:0000313|EMBL:ADV61466.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM4_65_b1_redo_sep16_scaffold_5391_2
unknown

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comp(864..1310)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5391_3
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1326..3140)
-----------------
DNA (1815bp)
protein (605aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJI8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EWT01096.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
PLM4_65_b1_redo_sep16_scaffold_5391_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3258..4451
-----------------
DNA (1194bp)
protein (398aa)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T816_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69893.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5391_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(4458..6557)
-----------------
DNA (2100bp)
protein (700aa)
Peptidase M1, membrane alanine aminopeptidase (Fragment) Tax=uncultured prokaryote RepID=H5SKY0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KDA53015.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_5391_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6604..9282)
-----------------
DNA (2679bp)
protein (893aa)
ATPase AAA-2 domain protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEW2_SYNFM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
protein disaggregation chaperone
PLM4_65_b1_redo_sep16_scaffold_5391_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9285..10289)
-----------------
DNA (1005bp)
protein (335aa)
cytochrome C biogenesis protein Tax=Acidithiobacillus thiooxidans RepID=UPI00026250C1
Uncharacterized protein {ECO:0000313|EMBL:ETX04487.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
cbpA; curved DNA-binding protein
PLM4_65_b1_redo_sep16_scaffold_5391_8
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10431..10685)
-----------------
DNA (255bp)
protein (85aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CYD2_TRURR
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADI14771.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
PLM4_65_b1_redo_sep16_scaffold_5391_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10896..11399
-----------------
DNA (504bp)
protein (168aa)
regulator Tax=Salisaeta longa RepID=UPI0003B70C6D
phaR; polyhydroxyalkanoate synthesis repressor PhaR
Putative regulator for granule-associated proteins {ECO:0000313|EMBL:ABC44741.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
PLM4_65_b1_redo_sep16_scaffold_5391_10
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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11396..11770
-----------------
DNA (375bp)
protein (125aa)
Poly(Hydroxyalkanoate) granule-associated protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIN7_ACCPU
Poly(Hydroxyalkanoate) granule-associated protein {ECO:0000313|EMBL:KFB74907.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
poly(hydroxyalkanoate) granule-associated protein
PLM4_65_b1_redo_sep16_scaffold_5391_11

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11847..12323
-----------------
DNA (477bp)
protein (159aa)
poly(3-hydroxyalkanoate) granule-associated protein PhaF Tax=Pseudomonas caeni RepID=UPI0003B73D90
Polyhydroxyalkanoate granule-associated protein {ECO:0000313|EMBL:BAH89669.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
poly(hydroxyalkanoate) granule-associated protein
PLM4_65_b1_redo_sep16_scaffold_5391_12
Marinobacter sp. ES-1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12326..13510
-----------------
DNA (1185bp)
protein (395aa)
Patatin Tax=Marinobacter sp. ES-1 RepID=U7FWI8_9ALTE
Patatin {ECO:0000313|EMBL:ERP89934.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ES-1.;"
Patatin domain-containing protein
Displaying 12 items

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