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PLM4_65_b1_redo_sep16_scaffold_5584

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5584_1
unknown

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comp(1..510)
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5584_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(548..1108)
-----------------
DNA (561bp)
protein (187aa)
Transcriptional regulator, TraR/DksA family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ15_KORVE
TraR/DksA family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_5584_3
unknown

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1194..1577
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5584_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(1556..2035)
-----------------
DNA (480bp)
protein (160aa)
Methyltransferase Tax=mine drainage metagenome RepID=T1B2E6_9ZZZZ
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_5584_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2035..2592)
-----------------
DNA (558bp)
protein (186aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
def; peptide deformylase (EC:3.5.1.31)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5584_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2672..3670
-----------------
DNA (999bp)
protein (333aa)
Alpha/beta hydrolase fold protein Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5I6_HALJB
Predicted hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:CDM66091.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
alpha/beta hydrolase fold protein
PLM4_65_b1_redo_sep16_scaffold_5584_7
RBG_13_ACD39_59_9_curated, ACD39, Bacteria

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3667..7071
-----------------
DNA (3405bp)
protein (1135aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYF5_THEOJ
Tax=RBG_13_ACD39_59_9_curated
PLM4_65_b1_redo_sep16_scaffold_5584_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7098..8429
-----------------
DNA (1332bp)
protein (444aa)
Amidohydrolase Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QFG5_SPILD
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADB38339.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
PLM4_65_b1_redo_sep16_scaffold_5584_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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8496..9857
-----------------
DNA (1362bp)
protein (454aa)
Strongly similar to phosphomannomutase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q013_9BACT
glmM; phosphomannomutase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_5584_10
unknown

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10161..10664
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5584_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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10850..11431
-----------------
DNA (582bp)
protein (194aa)
ftnA; putative ferritin bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
ftnA; putative ferritin
Tax=CSP1_3_Armatimonadetes
PLM4_65_b1_redo_sep16_scaffold_5584_12
unknown

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comp(11622..12398)
-----------------
DNA (777bp)
protein (259aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5584_13
unknown

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comp(12534..13265)
-----------------
DNA (732bp)
protein (244aa)

This feature has no annotations

Displaying 13 items

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