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PLM4_65_b1_redo_sep16_scaffold_5941

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5941_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1..339
-----------------
DNA (339bp)
protein (113aa)
Decaheme c-type cytochrome, DmsE family protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y6F4_9RHOO
decaheme c-type cytochrome, DmsE family
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_b1_redo_sep16_scaffold_5941_2
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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350..2605
-----------------
DNA (2256bp)
protein (752aa)
hypothetical protein bin=RBG_16_Aminicenantes_66_30 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_b1_redo_sep16_scaffold_5941_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2808..3608
-----------------
DNA (801bp)
protein (267aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_5941_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3847..5418
-----------------
DNA (1572bp)
protein (524aa)
Sensory box/response regulator Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJG8_9BACT
serine phosphatase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5941_5
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5475..6509
-----------------
DNA (1035bp)
protein (345aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YIE4_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX29991.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
methyltransferase FkbM family
PLM4_65_b1_redo_sep16_scaffold_5941_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6506..8533
-----------------
DNA (2028bp)
protein (676aa)
Putative glycosyltransferase Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DRM5_9CHRO
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KEZ19507.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
glycosyl transferase family 2
PLM4_65_b1_redo_sep16_scaffold_5941_7
unknown

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comp(8505..9182)
-----------------
DNA (678bp)
protein (226aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5941_8
unknown

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comp(9293..9988)
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5941_9
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10117..11493)
-----------------
DNA (1377bp)
protein (459aa)
Fis family two component sigma54 specific transcriptional regulator Tax=Alishewanella agri BL06 RepID=I9P1C5_9ALTE
Fis family two component sigma54 specific transcriptional regulator {ECO:0000313|EMBL:EIW88677.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella agri BL06.;"
two component, sigma54 specific, Fis family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_5941_10
Shewanella sp. cp20, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11490..12845)
-----------------
DNA (1356bp)
protein (452aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:KIO35736.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. cp20.;"
Integral membrane sensor signal transduction histidine kinase Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SQW3_FERBD
integral membrane sensor signal transduction histidine kinase
Displaying 10 items

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