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PLM4_65_b1_redo_sep16_scaffold_4200

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4200_1
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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2..1384
-----------------
DNA (1383bp)
protein (461aa)
aminopeptidase N bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
peptidase M1 membrane alanine aminopeptidase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM4_65_b1_redo_sep16_scaffold_4200_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1390..2313
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QR83_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39637.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
PLM4_65_b1_redo_sep16_scaffold_4200_3

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2382..2714
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EIB5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98194.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4200_4
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2701..2988
-----------------
DNA (288bp)
protein (96aa)
XRE family transcriptional regulator Tax=uncultured bacterium RepID=K2CYV8_9BACT
putative transcriptional regulator with C-terminal CBS domains
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
PLM4_65_b1_redo_sep16_scaffold_4200_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3268..3540
-----------------
DNA (273bp)
protein (91aa)
Prevent-host-death protein Tax=Rhodobacter sp. CACIA14H1 RepID=V7EL27_9RHOB
Prevent-host-death protein {ECO:0000313|EMBL:ESW60959.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
PLM4_65_b1_redo_sep16_scaffold_4200_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3761..5155)
-----------------
DNA (1395bp)
protein (465aa)
Amidophosphoribosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidophosphoribosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_4200_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5200..7479)
-----------------
DNA (2280bp)
protein (760aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_65_b1_redo_sep16_scaffold_4200_8
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7476..8186)
-----------------
DNA (711bp)
protein (237aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H1J0_DENA2
Tax=S_Thermoanaerobacterales_50_218
PLM4_65_b1_redo_sep16_scaffold_4200_9
CG_Omnitr_06, Omnitrophica, Bacteria

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comp(8183..8467)
-----------------
DNA (285bp)
protein (95aa)
Phosphoribosylformylglycinamidine synthetase PurS Tax=Rhodospirillum rubrum F11 RepID=G2TAZ4_RHORU
phosphoribosylformylglycinamidine synthase subunit PurS
Tax=CG_Omnitr_06
PLM4_65_b1_redo_sep16_scaffold_4200_10
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8457..9356)
-----------------
DNA (900bp)
protein (300aa)
Beta-lactamase-like Tax=delta proteobacterium MLMS-1 RepID=Q1NKK6_9DELT
Beta-lactamase-like {ECO:0000313|EMBL:EAT02235.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
beta-lactamase domain protein
PLM4_65_b1_redo_sep16_scaffold_4200_11
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9430..11076)
-----------------
DNA (1647bp)
protein (549aa)
Lytic transglycosylase catalytic Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEU9_DESAA
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACL03626.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
PLM4_65_b1_redo_sep16_scaffold_4200_12
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11424..11669)
-----------------
DNA (246bp)
protein (82aa)
Putative stress-responsive transcriptional regulator Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHL0_9FIRM
putative stress-responsive transcriptional regulator
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:AGL02703.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
PLM4_65_b1_redo_sep16_scaffold_4200_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(11720..13003)
-----------------
DNA (1284bp)
protein (428aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lewinella cohaerens genus=Lewinella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
BNR repeat-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_4200_14
RLO_RIF03_38_15, RIF3, Bacteria

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comp(13027..14397)
-----------------
DNA (1371bp)
protein (457aa)
sulfatase bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sulfatase
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM4_65_b1_redo_sep16_scaffold_4200_15
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

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14554..15381
-----------------
DNA (828bp)
protein (276aa)
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:KKW11977.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
Displaying 15 items

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