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PLM4_65_b1_redo_sep16_scaffold_1795

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1795_1
unknown

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1..138
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1795_2

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256..1503
-----------------
DNA (1248bp)
protein (416aa)
Marine sediment metagenome DNA, contig: S01H1_S17185 {ECO:0000313|EMBL:GAG24054.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Hamp domain/gaf domain/hd domain protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
PAS/PAC sensor-containing diguanylate cyclase
PLM4_65_b1_redo_sep16_scaffold_1795_3
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1517..2794)
-----------------
DNA (1278bp)
protein (426aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI0003788A64
Response regulator {ECO:0000313|EMBL:EON18842.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
response regulator receiver modulated diguanylate phosphodiesterase
PLM4_65_b1_redo_sep16_scaffold_1795_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(2842..3792)
-----------------
DNA (951bp)
protein (317aa)
Protein kinase/protein beta WD-40 repeat bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_1795_5
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3857..3994)
-----------------
DNA (138bp)
protein (46aa)
Uncharacterized protein Tax=Bacillus sp. CPSM8 RepID=V7Q1Q1_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ESU25726.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1795_6
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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4052..6982
-----------------
DNA (2931bp)
protein (977aa)
TonB-denpendent receptor Tax=Pseudoalteromonas flavipulchra RepID=UPI000299FBC3
Oar protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_b1_redo_sep16_scaffold_1795_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6996..9665
-----------------
DNA (2670bp)
protein (890aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WI5_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ85980.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_1795_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(9625..10170)
-----------------
DNA (546bp)
protein (182aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P41_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_1795_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(10167..12887)
-----------------
DNA (2721bp)
protein (907aa)
Protein kinase/protein beta WD-40 repeat Tax=uncultured bacterium BAC10-4 RepID=Q4JIS4_9BACT
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_1795_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(12904..13335)
-----------------
DNA (432bp)
protein (144aa)
Ribonuclease VapC Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQA0_MEIRD
PilT domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_1795_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13336..13569)
-----------------
DNA (234bp)
protein (78aa)
CopG domain protein DNA-binding domain protein Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQ99_MEIRD
DNA-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_1795_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(13566..13922)
-----------------
DNA (357bp)
protein (119aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZL0_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_1795_13
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13939..14577)
-----------------
DNA (639bp)
protein (213aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIV1_ROSCS
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
PLM4_65_b1_redo_sep16_scaffold_1795_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(14574..15197)
-----------------
DNA (624bp)
protein (208aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZL0_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_1795_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(15242..15802)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GPC5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55753.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
DinB-like domain protein
PLM4_65_b1_redo_sep16_scaffold_1795_16
unknown

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15936..16328
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1795_17
unknown

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comp(16377..16721)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1795_18
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(16801..19554)
-----------------
DNA (2754bp)
protein (918aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UH4_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM4_65_b1_redo_sep16_scaffold_1795_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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19639..20634
-----------------
DNA (996bp)
protein (332aa)
Magnesium and cobalt transport protein CorA bin=GWF2_Methylomirabilis_70_14 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
magnesium and cobalt transport protein CorA
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_1795_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(20631..23612)
-----------------
DNA (2982bp)
protein (994aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZL7_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ84898.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein
Displaying 20 items

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