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PLM4_65_b1_redo_sep16_scaffold_25337

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_25337_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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55..1011
-----------------
DNA (957bp)
protein (319aa)
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B Tax=Solibacter usitatus (strain Ellin6076) RepID=TRUB_SOLUE
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_25337_2
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1059..1319
-----------------
DNA (261bp)
protein (87aa)
30S ribosomal protein S15 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BU6_STIAD
rpsO; 30S ribosomal protein S15
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM4_65_b1_redo_sep16_scaffold_25337_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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1417..3660
-----------------
DNA (2244bp)
protein (748aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polynucleotide phosphorylase
PLM4_65_b1_redo_sep16_scaffold_25337_4
Caldithrix abyssi, Caldithrix, Bacteria

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3752..4522
-----------------
DNA (771bp)
protein (257aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Putative GTP cyclohydrolase 1 type 2 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWH5_9BACT
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_25337_5
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4755..5558)
-----------------
DNA (804bp)
protein (268aa)
TatD-related deoxyribonuclease Tax=Rhodospirillum photometricum DSM 122 RepID=H6SIW8_RHOPH
TatD-related deoxyribonuclease
TatD-related deoxyribonuclease {ECO:0000313|EMBL:CCG07933.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
PLM4_65_b1_redo_sep16_scaffold_25337_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(5555..5938)
-----------------
DNA (384bp)
protein (128aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] bin=CNBR_ACIDO species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methionyl-tRNA synthetase (EC:6.1.1.10)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 6 items

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