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PLM4_65_b1_redo_sep16_scaffold_25496

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_25496_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(1..297)
-----------------
DNA (297bp)
protein (99aa)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_25496_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(437..2368)
-----------------
DNA (1932bp)
protein (644aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360B9EF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_25496_3

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2533..3087
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LHL4_THEPS
Marine sediment metagenome DNA, contig: S03H2_S02405 {ECO:0000313|EMBL:GAH60651.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_25496_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3453..3902)
-----------------
DNA (450bp)
protein (150aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM4_65_b1_redo_sep16_scaffold_25496_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3913..5142)
-----------------
DNA (1230bp)
protein (410aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Phosphonopyruvate decarboxylase-related protein Tax=Pedosphaera parvula Ellin514 RepID=B9XH05_9BACT bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_25496_6
unknown

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comp(5176..5601)
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_25496_7
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(5630..5920)
-----------------
DNA (291bp)
protein (97aa)
2-keto-3-deoxy-phosphogluconate aldolase Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6Q8_ISOPI bin=16ft_combo_ws3_JS1 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:AGY57202.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Displaying 7 items

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