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PLM4_65_b1_redo_sep16_scaffold_2243

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2243_1
R_NC10_66_22, NC10, Bacteria

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comp(3..1043)
-----------------
DNA (1041bp)
protein (347aa)
acyl-CoA reductase bin=bin3_NC10 species=Bacillus sp. L1(2012) genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
putative acyl-CoA reductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_2243_2
unknown

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1085..1480
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2243_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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1727..2314
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein Tax=Geobacter sp. (strain FRC-32) RepID=B9M8V0_GEOSF bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2243_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2317..2727
-----------------
DNA (411bp)
protein (137aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_2243_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2790..3236
-----------------
DNA (447bp)
protein (149aa)
Activator of Hsp90 ATPase 1 family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI86_9BACT
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EEF60347.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
activator of hsp90 ATPase 1 family protein
PLM4_65_b1_redo_sep16_scaffold_2243_6
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3249..4283)
-----------------
DNA (1035bp)
protein (345aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_51_34 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_65_b1_redo_sep16_scaffold_2243_7
CSP1_5_NC10, NC10, Bacteria

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comp(4348..5442)
-----------------
DNA (1095bp)
protein (365aa)
acyl protein synthase/acyl-CoA reductase-like protein bin=bin3_NC10 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
putative acyl protein synthetase
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_2243_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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5552..6226
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1BMA9_9ZZZZ
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2243_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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6219..8861
-----------------
DNA (2643bp)
protein (881aa)
Serine/threonine protein kinase (EC:2.7.11.1)
serine/threonin protein kinase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2243_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8904..9554
-----------------
DNA (651bp)
protein (217aa)
RNA polymerase
RNA polymerase sigma factor bin=GWF2_Lentisphaerae_52_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_65_b1_redo_sep16_scaffold_2243_11
unknown

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9551..10057
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2243_12
unknown

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10054..10590
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2243_13
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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10623..11591
-----------------
DNA (969bp)
protein (323aa)
Putative magnesium and cobalt transport protein Tax=uncultured Acidobacteria bacterium RepID=Q7X2U8_9BACT
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
magnesium and cobalt transport protein CorA
PLM4_65_b1_redo_sep16_scaffold_2243_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(11676..14183)
-----------------
DNA (2508bp)
protein (836aa)
DEAD_2 domain protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XU08_9BACT
DEAD/DEAH box helicase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2243_15
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

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14294..15502
-----------------
DNA (1209bp)
protein (403aa)
Nucleoside transporter Tax=Rivularia sp. PCC 7116 RepID=K9RB87_9CYAN
nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
PLM4_65_b1_redo_sep16_scaffold_2243_16
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(15506..16357)
-----------------
DNA (852bp)
protein (284aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
alpha/beta hydrolase fold protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM4_65_b1_redo_sep16_scaffold_2243_17
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

16592..18106
-----------------
DNA (1515bp)
protein (505aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
Putative D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase Tax=planctomycete KSU-1 RepID=I3IN38_9PLAN
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
PLM4_65_b1_redo_sep16_scaffold_2243_18
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

18173..19405
-----------------
DNA (1233bp)
protein (411aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54345.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Serine phosphatase RsbU
PLM4_65_b1_redo_sep16_scaffold_2243_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(19411..20106)
-----------------
DNA (696bp)
protein (232aa)
Transferase hexapeptide repeat containing protein Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWU0_TRURR
transferase hexapeptide repeat containing protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2243_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(20103..21059)
-----------------
DNA (957bp)
protein (319aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] bin=bin5_DeltaP species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Nitrospirae_64_22_curated
Displaying 20 items

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