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PLM4_65_b1_redo_sep16_scaffold_2466

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2466_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3..524
-----------------
DNA (522bp)
protein (174aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
O-antigen polymerase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_2466_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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521..1450
-----------------
DNA (930bp)
protein (310aa)
Geranylgeranyl pyrophosphate synthase Tax=Singulisphaera acidiphila RepID=L0DR59_SINAD
geranylgeranyl pyrophosphate synthase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2466_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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1498..3519
-----------------
DNA (2022bp)
protein (674aa)
1-deoxy-D-xylulose-5-phosphate synthase 1 Tax=Geobacter sulfurreducens RepID=DXS1_GEOSL
dxs-1; 1-deoxy-D-xylulose-5-phosphate synthase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2466_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3494..4249
-----------------
DNA (756bp)
protein (252aa)
Hemolysin A {ECO:0000313|EMBL:CDM66031.1}; EC=2.1.1.226 {ECO:0000313|EMBL:CDM66031.1};; EC=2.1.1.227 {ECO:0000313|EMBL:CDM66031.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA methyltransferase Tax=Thermodesulfatator atlanticus RepID=UPI0003B753D3
tly; hemolysin TlyA-family protein
PLM4_65_b1_redo_sep16_scaffold_2466_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4246..5133
-----------------
DNA (888bp)
protein (296aa)
NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000255|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=PPNK_GEODF
ATP-NAD/AcoX kinase
PLM4_65_b1_redo_sep16_scaffold_2466_6

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5140..9129
-----------------
DNA (3990bp)
protein (1330aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B21_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AGT45852.1}; species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2466_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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9129..11990
-----------------
DNA (2862bp)
protein (954aa)
surface antigen (D15) bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
surface antigen (D15)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2466_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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12030..13259
-----------------
DNA (1230bp)
protein (410aa)
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
PLM4_65_b1_redo_sep16_scaffold_2466_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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13279..14511
-----------------
DNA (1233bp)
protein (411aa)
Glycosyl transferase, group 1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL74_RUBGI
glycosyl transferase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2466_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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14511..15701
-----------------
DNA (1191bp)
protein (397aa)
Glycosyl transferases group 1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYA6_THERP
Uncharacterized protein {ECO:0000313|EMBL:KDA54450.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
glycosyl transferase family protein
PLM4_65_b1_redo_sep16_scaffold_2466_11
unknown

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15712..16053
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2466_12
unknown

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16091..16462
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2466_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16459..18333
-----------------
DNA (1875bp)
protein (625aa)
Glycosyl transferase family 2 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCP2_ACIET
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACM32042.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
PLM4_65_b1_redo_sep16_scaffold_2466_14
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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18387..20099
-----------------
DNA (1713bp)
protein (571aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MI81_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06626.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Displaying 14 items

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