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PLM4_65_b1_redo_sep16_scaffold_2834

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2834_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(1..1092)
-----------------
DNA (1092bp)
protein (364aa)
L-lysine 6-transaminase (EC:2.6.1.36)
L-lysine 6-transaminase Tax=Holophaga foetida DSM 6591 RepID=H1NZ27_9BACT
L-lysine 6-aminotransferase {ECO:0000313|EMBL:KDA55077.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_2834_2
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(1201..2352)
-----------------
DNA (1152bp)
protein (384aa)
Diguanylate cyclase bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
GAF sensor-containing diguanylate cyclase
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
PLM4_65_b1_redo_sep16_scaffold_2834_3
bacterium UASB14, Bacteria

Not on your lists

comp(2428..4251)
-----------------
DNA (1824bp)
protein (608aa)
BatD Tax=Cystobacter fuscus DSM 2262 RepID=S9PKR6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:GAK54585.1}; species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2834_4
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(4248..5147)
-----------------
DNA (900bp)
protein (300aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003641BBF
Tetratricopeptide repeat.
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
PLM4_65_b1_redo_sep16_scaffold_2834_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5144..6166)
-----------------
DNA (1023bp)
protein (341aa)
BatB protein bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
von Willebrand factor type A
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_2834_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(6163..7158)
-----------------
DNA (996bp)
protein (332aa)
Double-transmembrane region domain protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XZ13_9BACT
Mg-chelatase subunit ChlD
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2834_7
unknown

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comp(7155..8186)
-----------------
DNA (1032bp)
protein (344aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2834_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8183..9142)
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJP4_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74212.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM4_65_b1_redo_sep16_scaffold_2834_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9158..10183)
-----------------
DNA (1026bp)
protein (342aa)
ATPase AAA Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B47B0A
ATPase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2834_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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10203..11135
-----------------
DNA (933bp)
protein (311aa)
Ribosomal RNA small subunit methyltransferase A bin=GWC2_Methylomirabilis_70_16 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dimethyladenosine transferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_2834_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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11153..13591
-----------------
DNA (2439bp)
protein (813aa)
FtsK/SpoIIIE family protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
FtsK/SpoIIIE family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2834_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13626..14093)
-----------------
DNA (468bp)
protein (156aa)
Putative uncharacterized protein Tax=unidentified eubacterium SCB49 RepID=A6ELL0_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM4_65_b1_redo_sep16_scaffold_2834_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14264..15751)
-----------------
DNA (1488bp)
protein (496aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-); K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin7_NC10_sister organism_group=NC10
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-)
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_2834_14
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16032..16973
-----------------
DNA (942bp)
protein (314aa)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
hypothetical protein Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI0003615968
methionyl-tRNA formyltransferase fmt
PLM4_65_b1_redo_sep16_scaffold_2834_15
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

16970..18397
-----------------
DNA (1428bp)
protein (476aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Ribosomal RNA small subunit methyltransferase B Tax=uncultured Acidobacteria bacterium RepID=H5SCJ9_9BACT
sun protein
PLM4_65_b1_redo_sep16_scaffold_2834_16
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18474..18761
-----------------
DNA (288bp)
protein (96aa)
Histone family DNA-binding protein Tax=Methylocystis sp. (strain SC2) RepID=J7QM33_METSZ
histone family DNA-binding protein
Histone family DNA-binding protein {ECO:0000313|EMBL:CCJ06223.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
Displaying 16 items

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