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PLM4_65_b1_redo_sep16_scaffold_2882

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2882_1
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

1..1608
-----------------
DNA (1608bp)
protein (536aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U30_SOLUE
serine/threonine protein kinase
Tax=GWF2_Elusimicrobia_62_30_curated
PLM4_65_b1_redo_sep16_scaffold_2882_2
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

1691..2920
-----------------
DNA (1230bp)
protein (410aa)
Putative Zn-dependent peptidase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGU7_CHLTF
putative Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AEP11447.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_2882_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2917..4221
-----------------
DNA (1305bp)
protein (435aa)
Peptidase M16B family, nonpeptidase-like protein bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M16 domain protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_2882_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(4175..5947)
-----------------
DNA (1773bp)
protein (591aa)
Cyclic nucleotide-binding domain-containing protein Tax=Myxococcus RepID=F8CQ88_MYXFH
cyclic nucleotide-binding domain-containing protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2882_5
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6037..6528
-----------------
DNA (492bp)
protein (164aa)
TPR domain protein bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM4_65_b1_redo_sep16_scaffold_2882_6
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6576..8018
-----------------
DNA (1443bp)
protein (481aa)
ferredoxin--NADP(+) reductase (EC:1.18.1.2)
Ferredoxin--NADP(+) reductase {ECO:0000313|EMBL:ACL25341.1}; EC=1.18.1.2 {ECO:0000313|EMBL:ACL25341.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Ferredoxin--NADP(+) reductase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G3T9_CHLAD
PLM4_65_b1_redo_sep16_scaffold_2882_7
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(8030..9562)
-----------------
DNA (1533bp)
protein (511aa)
Glycosyltransferase bin=GWF2_Planctomycetes_42_9 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
glycosyltransferase
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM4_65_b1_redo_sep16_scaffold_2882_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9603..10460)
-----------------
DNA (858bp)
protein (286aa)
pstB; high-affinity phosphate transport protein (ABC superfamily, atp_bind) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pstB; high-affinity phosphate transport protein (ABC superfamily, atp_bind)
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_2882_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(10506..12152)
-----------------
DNA (1647bp)
protein (549aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEI4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68161.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2882_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(12164..14035)
-----------------
DNA (1872bp)
protein (624aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEI5_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM4_65_b1_redo_sep16_scaffold_2882_11
unknown

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comp(14104..14295)
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2882_12
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(14373..15335)
-----------------
DNA (963bp)
protein (321aa)
Strongly similar to phosphate binding protein of ABC-type phosphate transport system Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2D4_9BACT
Strongly similar to phosphate binding protein of ABC-type phosphate transport system {ECO:0000313|EMBL:CAJ74176.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
pstS; phosphate transport system substrate-binding protein
PLM4_65_b1_redo_sep16_scaffold_2882_13
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(15525..16205)
-----------------
DNA (681bp)
protein (227aa)
Phosphate-specific transport system accessory protein PhoU Tax=Candidatus Nitrospira defluvii RepID=D8PFT9_9BACT
phoU; phosphate transport system protein PhoU
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
PLM4_65_b1_redo_sep16_scaffold_2882_14
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(16306..17661)
-----------------
DNA (1356bp)
protein (452aa)
Phosphate-selective porin O and P Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M878_GEODF
Uncharacterized protein {ECO:0000313|EMBL:KDA53456.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
phosphate-selective porin O and P
PLM4_65_b1_redo_sep16_scaffold_2882_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(17831..19597)
-----------------
DNA (1767bp)
protein (589aa)
Sensor protein yycG (EC:2.7.13.3) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
putative phosphate regulon sensor histidine kinase PhoR (EC:2.7.13.3)
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_2882_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19920..21560)
-----------------
DNA (1641bp)
protein (547aa)
putative exopolyphosphatase (EC:3.6.1.11)
Putative Exopolyphosphatase Tax=Candidatus Nitrospira defluvii RepID=D8PFT8_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM4_65_b1_redo_sep16_scaffold_2882_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(21580..22563)
-----------------
DNA (984bp)
protein (328aa)
Phosphate/sulphate permease bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2882_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22579..23319)
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein Tax=Pedobacter agri RepID=UPI00029A944D
phosphate transport regulator
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2882_19
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23402..25552
-----------------
DNA (2151bp)
protein (717aa)
ppk; polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium; Yellowstone B-Prime).;"
Polyphosphate kinase Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JJX2_SYNJB
PLM4_65_b1_redo_sep16_scaffold_2882_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25549..26610)
-----------------
DNA (1062bp)
protein (354aa)
metal-binding protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000367A718
CHAD domain containing protein
CHAD domain containing protein {ECO:0000313|EMBL:AHG91533.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2882_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26607..27113)
-----------------
DNA (507bp)
protein (169aa)
Putative phosphohistidine phosphatase, SixA Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7E2_ANADF
putative phosphohistidine phosphatase SixA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2882_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(27127..27936)
-----------------
DNA (810bp)
protein (270aa)
Two component transcriptional regulator, winged helix family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZT43_OPITP
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACB75832.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_b1_redo_sep16_scaffold_2882_23
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

28161..28472
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7U141_DESML
Uncharacterized protein {ECO:0000313|EMBL:KDA53992.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2882_24
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28456..28941)
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALM2T RepID=UPI000376AB5B
Maf-like protein EL26_14060 {ECO:0000256|HAMAP-Rule:MF_00528}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
Septum formation protein Maf
PLM4_65_b1_redo_sep16_scaffold_2882_25
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(29124..31703)
-----------------
DNA (2580bp)
protein (860aa)
von Willebrand factor type A Tax=uncultured Acidobacteria bacterium RepID=H5SPR0_9BACT
Mg-chelatase subunit ChlD
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2882_26
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(31756..32547)
-----------------
DNA (792bp)
protein (264aa)
Mg-chelatase subunit ChlD Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDA2_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:KDA54813.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Mg-chelatase subunit ChlD
PLM4_65_b1_redo_sep16_scaffold_2882_27
unknown

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comp(32487..33599)
-----------------
DNA (1113bp)
protein (371aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2882_28
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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34165..35367
-----------------
DNA (1203bp)
protein (401aa)
class V aminotransferase (EC:2.8.1.7)
Aminotransferase class V Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLB1_THEM7
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM4_65_b1_redo_sep16_scaffold_2882_29
unknown

Not on your lists

35364..35480
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

Displaying 29 items

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