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PLM4_65_b1_redo_sep16_scaffold_11726

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11726_1
unknown

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comp(1..1155)
-----------------
DNA (1155bp)
protein (385aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_11726_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1241..1765)
-----------------
DNA (525bp)
protein (175aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Rhodanobacter denitrificans RepID=M4NEX4_9GAMM
PLM4_65_b1_redo_sep16_scaffold_11726_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1762..3552)
-----------------
DNA (1791bp)
protein (597aa)
Long-chain-fatty-acid--CoA ligase Tax=Cystobacter fuscus DSM 2262 RepID=S9QJ83_9DELT
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EPX61354.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
AMP-binding protein
PLM4_65_b1_redo_sep16_scaffold_11726_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3571..3813)
-----------------
DNA (243bp)
protein (81aa)
Acyl carrier protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QXG3_9DELT
Acyl carrier protein {ECO:0000313|EMBL:EPX61353.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
acp; acyl carrier protein
PLM4_65_b1_redo_sep16_scaffold_11726_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3810..4394)
-----------------
DNA (585bp)
protein (195aa)
Isoprenylcysteine carboxyl methyltransferase (Icmt) family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BD7_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO69060.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_11726_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4404..5480)
-----------------
DNA (1077bp)
protein (359aa)
Chalcone/stilbene synthase family protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIM1_CORCM
pks11; chalcone/stilbene synthase family protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_65_b1_redo_sep16_scaffold_11726_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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5675..6028
-----------------
DNA (354bp)
protein (118aa)
Transcriptional regulator, ArsR family Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQM4_SPHAL
ArsR family regulatory protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_65_b1_redo_sep16_scaffold_11726_8
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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6025..6909
-----------------
DNA (885bp)
protein (295aa)
Methyltransferase type 11 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K282_DEHLB
methyltransferase type 11
Tax=BJP_S1_SUB10_Methanoculleus_61_9
PLM4_65_b1_redo_sep16_scaffold_11726_9
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6915..8132
-----------------
DNA (1218bp)
protein (406aa)
Uncharacterized protein Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L219_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EST38283.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_11726_trna_1
unknown

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comp(8189..8262)
-----------------
DNA (74bp)
transferRNA Met
PLM4_65_b1_redo_sep16_scaffold_11726_10
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(8322..8759)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3V4Z5_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EPG76498.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_11726_11
unknown

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comp(8920..9030)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

Displaying 12 items

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