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PLM4_65_b1_redo_sep16_scaffold_11825

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11825_1

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comp(61..864)
-----------------
DNA (804bp)
protein (268aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
Menaquinone via futalosine step 1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1J4_9BACT
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_11825_2

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comp(867..2207)
-----------------
DNA (1341bp)
protein (447aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
Transcription termination factor Rho Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7VXS1_9BACT
rho; transcription termination factor Rho
PLM4_65_b1_redo_sep16_scaffold_11825_3
CSP1_5_NC10, NC10, Bacteria

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comp(2182..2769)
-----------------
DNA (588bp)
protein (196aa)
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein bin=bin3_NC10 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
engB; ribosome biogenesis GTP-binding protein YsxC/EngB
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_11825_4

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comp(2895..5312)
-----------------
DNA (2418bp)
protein (806aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
Lon-A peptidase (EC:3.4.21.53)
Lon protease Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7VTH1_9BACT
PLM4_65_b1_redo_sep16_scaffold_11825_5

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comp(5315..6559)
-----------------
DNA (1245bp)
protein (415aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7VYC8_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
PLM4_65_b1_redo_sep16_scaffold_11825_6

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comp(6746..7348)
-----------------
DNA (603bp)
protein (201aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1J1_9BACT
PLM4_65_b1_redo_sep16_scaffold_11825_7

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comp(7371..8726)
-----------------
DNA (1356bp)
protein (452aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
Trigger factor Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7VXR7_9BACT
trigger factor Tig
PLM4_65_b1_redo_sep16_scaffold_11825_trna_2
unknown

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comp(8760..8845)
-----------------
DNA (86bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_11825_trna_1
unknown

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comp(8892..8963)
-----------------
DNA (72bp)
transferRNA Lys
Displaying 9 items

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