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PLM4_65_b1_redo_sep16_scaffold_13385

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_13385_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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1..291
-----------------
DNA (291bp)
protein (97aa)
NADH-quinone oxidoreductase subunit B bin=GWC2_Syntrophus__56_31 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
NADH-quinone oxidoreductase subunit B
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_13385_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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254..1945
-----------------
DNA (1692bp)
protein (564aa)
NADH-quinone oxidoreductase subunit C/D Tax=Bdellovibrio exovorus JSS RepID=M4VCF7_9DELT
NADH dehydrogenase I,D subunit
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_13385_3
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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1942..2598
-----------------
DNA (657bp)
protein (219aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=uncultured prokaryote RepID=H5SP81_9ZZZZ
NADH dehydrogenase I chain I
Tax=RBG_13_RIF03_48_7_curated
PLM4_65_b1_redo_sep16_scaffold_13385_4
unknown

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comp(2649..3047)
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_13385_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(3044..3661)
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A4D0B
RNA polymerase sigma factor
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_13385_6
unknown

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comp(3661..4131)
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003608BE0
PLM4_65_b1_redo_sep16_scaffold_13385_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4258..5634)
-----------------
DNA (1377bp)
protein (459aa)
Heavy metal sensor signal transduction histidine kinase Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5I1_ALIDK
heavy metal sensor signal transduction histidine kinase
Tax=RBG_13_Deltaproteobacteria_51_10_curated
PLM4_65_b1_redo_sep16_scaffold_13385_8
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(5631..6323)
-----------------
DNA (693bp)
protein (231aa)
Putative 2-component transcriptional regulator bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
winged helix family two component transcriptional regulator
Tax=GWB1_Bdellovibrionales_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_13385_9
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6453..6863
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein Tax=Chryseobacterium sp. CF314 RepID=J3CDC7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF75718.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_13385_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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6879..8417
-----------------
DNA (1539bp)
protein (513aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Displaying 10 items

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