| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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PLM4_65_b1_redo_sep16_scaffold_7028_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
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Not on your lists |
2..532
----------------- DNA (531bp) protein (177aa) |
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
UBA/THIF-type NAD/FAD binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
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PLM4_65_b1_redo_sep16_scaffold_7028_2
unknown
|
Not on your lists |
714..1028
----------------- DNA (315bp) protein (105aa) |
This feature has no annotations |
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PLM4_65_b1_redo_sep16_scaffold_7028_3
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1022..1846
----------------- DNA (825bp) protein (275aa) |
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RA59_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EGK72598.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
diguanylate cyclase
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PLM4_65_b1_redo_sep16_scaffold_7028_4
Arthrobacter sp. AK-1, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
1894..2439
----------------- DNA (546bp) protein (182aa) |
putative sensor histidine kinase (EC:2.7.13.3)
Putative signal transduction histidine kinase Tax=Arthrobacter sp. AK-1 RepID=A6YFI6_9MICC
Putative signal transduction histidine kinase {ECO:0000313|EMBL:ABR66990.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-1.;"
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PLM4_65_b1_redo_sep16_scaffold_7028_5
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria
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Not on your lists |
comp(2446..3597)
----------------- DNA (1152bp) protein (384aa) |
Response regulator receiver sensor signal transduction histidine kinase bin=GWB2_Elusimicrobium_63_22 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
putative histidine kinase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
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PLM4_65_b1_redo_sep16_scaffold_7028_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3594..4991)
----------------- DNA (1398bp) protein (466aa) |
Sigma-54 dependent DNA-binding response regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAD3_MYXSD
Fis family transcriptional regulator {ECO:0000313|EMBL:AKF82192.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
sigma-54 dependent DNA-binding response regulator
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PLM4_65_b1_redo_sep16_scaffold_7028_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
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Not on your lists |
5136..6956
----------------- DNA (1821bp) protein (607aa) |
Peptidase M16 domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFB9_9BACT bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:KDA53463.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
zinc-dependent peptidase M16 family protein
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PLM4_65_b1_redo_sep16_scaffold_7028_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
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Not on your lists |
6953..8482
----------------- DNA (1530bp) protein (510aa) |
Uncharacterized protein {ECO:0000313|EMBL:KDA53464.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
peptidase M16 domain-containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase M16 domain-containing protein
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PLM4_65_b1_redo_sep16_scaffold_7028_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
8495..9403
----------------- DNA (909bp) protein (303aa) |
DNA-formamidopyrimidine glycosylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-formamidopyrimidine glycosylase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM4_65_b1_redo_sep16_scaffold_7028_10
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
9554..10567
----------------- DNA (1014bp) protein (338aa) |
Regulatory protein, LuxR, putative Tax=Mycobacterium RepID=J9WF86_9MYCO
Regulatory protein, LuxR, putative
Regulatory protein, LuxR, putative {ECO:0000313|EMBL:AFS14843.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium indicus pranii MTCC 9506.;"
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PLM4_65_b1_redo_sep16_scaffold_7028_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(10617..11072)
----------------- DNA (456bp) protein (152aa) |
Molybdopterin converting factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A904_GEMAT
molybdopterin converting factor
Molybdopterin converting factor {ECO:0000313|EMBL:BAH38714.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
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PLM4_65_b1_redo_sep16_scaffold_7028_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
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Not on your lists |
comp(11075..11320)
----------------- DNA (246bp) protein (82aa) |
Molybdopterin converting factor, subunit 1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFI3_SINAD
molybdopterin converting factor subunit 1
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
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PLM4_65_b1_redo_sep16_scaffold_7028_13
unknown
|
Not on your lists |
comp(11404..12015)
----------------- DNA (612bp) protein (204aa) |
This feature has no annotations |
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PLM4_65_b1_redo_sep16_scaffold_7028_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
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Not on your lists |
12436..13713
----------------- DNA (1278bp) protein (426aa) |
Acyl-CoA carboxylase component bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
methylcrotonoyl-CoA carboxylase
Tax=RBG_13_Acidobacteria_68_16_curated
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PLM4_65_b1_redo_sep16_scaffold_7028_15
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13729..16329)
----------------- DNA (2601bp) protein (867aa) |
M23 peptidase domain-containing protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UKW9_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF85102.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
M23 peptidase domain-containing protein
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PLM4_65_b1_redo_sep16_scaffold_7028_16
unknown
|
Not on your lists |
comp(16462..16542)
----------------- DNA (81bp) protein (27aa) |
This feature has no annotations |