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PLM4_65_b1_redo_sep16_scaffold_619_44

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(44585..45181)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484B72 similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 181.0
  • Bit_score: 142
  • Evalue 3.10e-31
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EKU97517.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 180.0
  • Bit_score: 142
  • Evalue 5.70e-31
rpoE; RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 181.0
  • Bit_score: 141
  • Evalue 1.50e-31

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Taxonomy

Leptolyngbya sp. PCC 7375 → Leptolyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGCGATCGACCCATCCTCTTCGACTCCCTTCCGCGCCAGCGACGATCTGGCGCTCGTCAAGCGCGTCGTCGACCGCCGGCAGGAAGCCCTGGCCGAGCTCTACGATCGCTATGCGTCCCTGCTGCTCGCCGTCGCCCGGCGTATTCTGGGCAACCCCACCGACGCCGAGGAGGTGCTGCGGGAGACCTTTTTCCAGGCCTGGAATCAGGCGGGGCTCTACGACTCCGGACGCTCGTCGGCCTCCACCTGGTTGGTGTTGATCGCCCGCAGCCGGGCACTCGGCCGGCTGCGCCAGCGGCAGGCGCTGGAACGCACCGCAGCGGGCGCGGAAGCCGAACCCCAGGCGCCGGCCACGTCCACTCGCGGCGATGAAGACACACTCACCCGGGAACGCAGGAAGCGCGTCCAGAATGCGCTGGCCGCCTTGCCGGTGCTACAGAAAGAGGTTCTCGAGCTGGCGTTCTTCGGCGGTCTCTCGCAGACCGAGATCGCCGAACGCATGCGAACGCCACTCGCAACCGTGAAGACGCGCGCGCTCTTGGCGATGAAGAAACTGCGTCGGGATCTCCGCGAGGAAATCCGGGAGCTAATGTGA
PROTEIN sequence
Length: 199
MAIDPSSSTPFRASDDLALVKRVVDRRQEALAELYDRYASLLLAVARRILGNPTDAEEVLRETFFQAWNQAGLYDSGRSSASTWLVLIARSRALGRLRQRQALERTAAGAEAEPQAPATSTRGDEDTLTRERRKRVQNALAALPVLQKEVLELAFFGGLSQTEIAERMRTPLATVKTRALLAMKKLRRDLREEIRELM*