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PLM4_65_b1_redo_sep16_scaffold_1949_13

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(11711..13357)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 543.0
  • Bit_score: 741
  • Evalue 5.50e-211
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 543.0
  • Bit_score: 696
  • Evalue 3.40e-198
Tax=RBG_13_Acidobacteria_68_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 530.0
  • Bit_score: 786
  • Evalue 1.60e-224

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Taxonomy

RBG_13_Acidobacteria_68_16_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1647
GTGAGCACGTCCCCGGCGCCACCCTCCCCATCCACCGAGCTCCTGGTCAGCGACGGCGCGCTGCGCTCGGCCGACGAACGTCGAGCGGTCGAGCACATGGCGGCGCTTCATGGTCTCGAGTTCGTCGATCTCGATCACTTCCGGATCGACAACGAGCTCTTCCACACCATTCCGTTCGAGCTCATGCTGCGCTACGGTTTCGTTCCCCAGGCGCAGCTCGCCGGCCGGATCGCCTTGGTGATGAAGGATCCGACGGACGTCGCGCGCCTCGACGAGCTGGAGCTGATGCTCGGCCAGCCGATCGAGGTACGCGTCGGAGTGGCGTCGGCGATCGAGGAGATTCTGCAGAAGTCGGAGTCGACTCAACGCGTGCTCGAGGAGGCGACCGAGGATTTCCGCATCCAGCTCGTACAGGAGGATGACCAAGGCGAGGAGGTACTGTCGATCGACAGCATTACCGCCGATTCGTCGCCGGTGATCAAGCTGGTCGATTCGACCGTGTTCAACGCCATCCAGCGCCGCGCTTCCGACATCCACATCGAGTCGCGCGACAACGAGGTCGTGATCAAGTACCGCATCGACGGGGTCCTCTACCAGGCGATGGAGCCGATCGACAAGCGCCATCACCAGACGATCATCAGCCGCATCAAGGTCATGTCGGAGCTCGACATCGCCGAGAAGCGCGTACCCCAGGACGGCCGCTTCAAGCTGCGATTGAAGGGCCGCACAATCGACTTCCGCGTTTCGATCATGCCCTCCGTGCACGGCGAGGATTGCGTCATCCGCATCCTCGACAAGGAGTCGATGTCGACGGAGTTCAAGAATCTGCGCCTCGACATCCTCGGCTTCGACGACGACACCATGCGCAAGGTGAGGAAGTCGATCCGCGAGCCCTACGGCATGGTGCTGGTGACCGGGCCGACTGGCAGCGGCAAGACGACGACGCTCTATGCCTGCCTCTCGGAGATCCAGTCGCCCGAGGACAAGATCATCACCATCGAGGATCCGGTCGAGTATCAGTTGAAAGGCATCACGCAGATTCCGGTCAACGAGAAGAAGGGACTCACCTTCGCCCGCGGCCTGCGGTCGATCCTGCGCCACGACCCGGACAAGGTGATGGTCGGCGAGATCCGTGACGAGGACACCGCTTCGATCGCCATTCAGTCGGCGCTCACCGGCCATCTCGTCTTCACCACCGTGCACGCCAACAACGTGGTCGACGTGCTCGGGCGCTTCCTCAACATGAAGGTCGACCTCTACAATTTCGTCTCGGCGTTGAACTGCGTGCTGGCCCAGCGGCTGGTGCGGCGGATTTGTCCGCACTGCCGGCGCGAAGCGGCGGTAGGCACCCAGCTACTGGAGGATTCGGGGCTCTCGCCGGCGGTCTACGGCGACCACCCATTCTTCGAAGGCGCCGGCTGTCTCGAATGCAACGGCACCGGATTCCTCGGCCGCCTCGCGGTCTCGGAATTGCTGAATCTCTCGGACCGTATCCGCGAGCTGATTCTGGAGAAGCGGCCGGCCTCGGAGATCAAGCGCGCGGCCAAGGAAGAGGGCATGCGGTTTCTGCGCGAATCAGCGCTCGAAAAAGCGCTGCAGGGAATGACGACGCTACGTGAGATCAATCGGTTTACCTTCGTGGATTGA
PROTEIN sequence
Length: 549
VSTSPAPPSPSTELLVSDGALRSADERRAVEHMAALHGLEFVDLDHFRIDNELFHTIPFELMLRYGFVPQAQLAGRIALVMKDPTDVARLDELELMLGQPIEVRVGVASAIEEILQKSESTQRVLEEATEDFRIQLVQEDDQGEEVLSIDSITADSSPVIKLVDSTVFNAIQRRASDIHIESRDNEVVIKYRIDGVLYQAMEPIDKRHHQTIISRIKVMSELDIAEKRVPQDGRFKLRLKGRTIDFRVSIMPSVHGEDCVIRILDKESMSTEFKNLRLDILGFDDDTMRKVRKSIREPYGMVLVTGPTGSGKTTTLYACLSEIQSPEDKIITIEDPVEYQLKGITQIPVNEKKGLTFARGLRSILRHDPDKVMVGEIRDEDTASIAIQSALTGHLVFTTVHANNVVDVLGRFLNMKVDLYNFVSALNCVLAQRLVRRICPHCRREAAVGTQLLEDSGLSPAVYGDHPFFEGAGCLECNGTGFLGRLAVSELLNLSDRIRELILEKRPASEIKRAAKEEGMRFLRESALEKALQGMTTLREINRFTFVD*