ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_5574_1

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(2..733)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 273.0
  • Bit_score: 201
  • Evalue 9.20e-49
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 234.0
  • Bit_score: 179
  • Evalue 8.10e-43
Tax=RBG_13_Deltaproteobacteria_49_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 251.0
  • Bit_score: 220
  • Evalue 1.60e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Deltaproteobacteria_49_15_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGAAGCGAACGCTCTCTCTCTTGCTGCTCGTCGCTTGTGCTGCCGCACTGCTCGTCGCCGGAGCCTGCTCGTCGTCCAGGAGCTCCGAAGAGGTCGAGCTCTGGTCTTGTCCGATGCACCCGGCCTATGTCACCGATCACCCCGGGACCTGCCCGATCTGCACCATGGATCTGGTCCGGAAGACGAAGGCCGTGGCGAACGAAGAGGTCGCTCCGGCCGGCGAGCGCCACATTCTCTTTTACCGCAGCCCGATGGATCCTGCGGTCACGTCGCCCACGCCCGCCAAGGACTCGATGGGGATGGACTTCGTCGCGGTTTACTCCGACGCGGCGGGCGGAGCACCCGCCGGTGCCGCCGGGCTCGATCTCGGTCCCGACTCGCTGCGGCGCGCCGGCGTAATGACGGAGGTCGCGACCGTCGGGCATCTCGCGCGCAGGTTCCGCGCCGCCGGCTCGGTGGTCGCGGACGAGCGCCGGCTGGTGCGCGCCCAGTCCAAGATCTCGGGCTGGGTCGAGAAGCTGCAGGTGAATTCGACCGGTCAATACGTGAACAAGGGCGCCCCGGCGATGGCGGTCTATTCGCCGGCGCTGCTCGCGGCGCAGAGCGAGTACCTTCTCGCCCGCGACGCCGCCAACCGCTTCGCCGGCTCGCAGCTCCCCGAAGTCCGCCGCGGCGGGCAGGACCTGCTGGTCGCGGCGCGGCGCCGGCTCGAGCTCCTGGATGTGCCCGAG
PROTEIN sequence
Length: 244
MKRTLSLLLLVACAAALLVAGACSSSRSSEEVELWSCPMHPAYVTDHPGTCPICTMDLVRKTKAVANEEVAPAGERHILFYRSPMDPAVTSPTPAKDSMGMDFVAVYSDAAGGAPAGAAGLDLGPDSLRRAGVMTEVATVGHLARRFRAAGSVVADERRLVRAQSKISGWVEKLQVNSTGQYVNKGAPAMAVYSPALLAAQSEYLLARDAANRFAGSQLPEVRRGGQDLLVAARRRLELLDVPE