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PLM4_65_b1_redo_sep16_scaffold_5574

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5574_1
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..733)
-----------------
DNA (732bp)
protein (244aa)
Efflux transporter, RND family, MFP subunit bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RND family efflux transporter MFP subunit
Tax=RBG_13_Deltaproteobacteria_49_15_curated
PLM4_65_b1_redo_sep16_scaffold_5574_2
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(730..2007)
-----------------
DNA (1278bp)
protein (426aa)
Outer membrane efflux protein Tax=Rhodopirellula europaea 6C RepID=M2AUG1_9PLAN
outer membrane efflux protein
Tax=RBG_13_Deltaproteobacteria_49_15_curated
PLM4_65_b1_redo_sep16_scaffold_5574_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2261..2998
-----------------
DNA (738bp)
protein (246aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023X9_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_5574_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(3011..4063)
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI0002E23CB8
SCP-like Type I secretion target protein
Tax=CG_Anaero_02
PLM4_65_b1_redo_sep16_scaffold_5574_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(4163..5149)
-----------------
DNA (987bp)
protein (329aa)
DNA polymerase III tau and gamma subunits Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1A1_THERP
DNA polymerase III subunit tau and gamma
DNA polymerase III tau and gamma subunits {ECO:0000313|EMBL:ACM06107.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM4_65_b1_redo_sep16_scaffold_5574_6
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5146..5787)
-----------------
DNA (642bp)
protein (214aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
Thymidylate kinase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
PLM4_65_b1_redo_sep16_scaffold_5574_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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5803..6804
-----------------
DNA (1002bp)
protein (334aa)
Putative tellurium resistance protein TerC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V8_GEMAT
terC; putative tellurium resistance protein TerC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_5574_8
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6769..7596)
-----------------
DNA (828bp)
protein (276aa)
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
Undecaprenyl-diphosphatase Tax=Magnetococcus sp. (strain MC-1) RepID=UPPP_MAGSM
PLM4_65_b1_redo_sep16_scaffold_5574_9
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

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7650..8531
-----------------
DNA (882bp)
protein (294aa)
Glucose-1-phosphate thymidylyltransferase bin=GWA2_Elusimicrobia_66_18 species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
glucose-1-phosphate thymidylyltransferase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
PLM4_65_b1_redo_sep16_scaffold_5574_10
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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8528..9082
-----------------
DNA (555bp)
protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AEP12413.1}; EC=5.1.3.13 {ECO:0000313|EMBL:AEP12413.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF3_CHLTF
PLM4_65_b1_redo_sep16_scaffold_5574_11
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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9093..10529
-----------------
DNA (1437bp)
protein (479aa)
Ribosylnicotinamide kinase-like protein (EC:2.7.1.22)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NVT2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EAT05825.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
PLM4_65_b1_redo_sep16_scaffold_5574_12
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

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10610..11752
-----------------
DNA (1143bp)
protein (381aa)
pntAA; NAD(P) transhydrogenase subunit alpha part 1 (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:AEP10188.1}; EC=1.6.1.2 {ECO:0000313|EMBL:AEP10188.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
NAD(P) transhydrogenase subunit alpha Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KM94_MICAA
PLM4_65_b1_redo_sep16_scaffold_5574_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11857..13275
-----------------
DNA (1419bp)
protein (473aa)
hypothetical protein
hypothetical protein bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24721.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
Displaying 13 items

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