ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_6795_17

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 15010..15633

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000361D2B0 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 195.0
  • Bit_score: 167
  • Evalue 9.50e-39
Marine sediment metagenome DNA, contig: S01H1_L07814 {ECO:0000313|EMBL:GAF77468.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 184.0
  • Bit_score: 157
  • Evalue 1.10e-35
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 191.0
  • Bit_score: 154
  • Evalue 3.10e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 624
TTGAAACCCGACGACGACTCTGCGGGCCCGCTCGGCGCCTCCGGGCAGGATTCCGGCGCGGGGGAAGTCACGGCTCTGCTGCTTCGCGCGCGCCGTGGCGATCCGCATGCCGCGGAGGAGCTCTTCGAGTTCGTCTATCAGGACCTGCGCCGGCTGGCGCGTCGTCAGCTCGCCGGCAAGCGGCCCGACGCGACGCTCTCGGCGACCGCGCTGGTCCATGAAACCTACCTGCGCCTGGCGCGACCCGGCAATCTCGATCAGCTCGACCGCAACCACTTCTTCGCCGTCGCGGCGCGGGCGATGCGCCAGATCATCGTCTCCGATGCCCGTCAACGGCGCGCCGTCAAACGCGGCGAGGGCGCGGTGCGCCTCGAGCTCGAGGATCTCCATCTCGCGGTCGACGACAAGTGCGAGGAGATTCTGGCCGTGCACGAGGCTCTCGACCAGCTCGAGAGTCTGGACTCCAGGCTCGCGCGGCTCGTCGAGCTGCGCTACTTCGCCGGCCTCTCGAGCGAAGAGACCGCGACCGTCACCGGGCAATCCGAACGCGGCCAGCGGCGCGATTGGGCCAAAGCGCGAGCGTTTCTCTTGCGCTCGCTCGAGAACCGCGAGGCGCAGCCATGA
PROTEIN sequence
Length: 208
LKPDDDSAGPLGASGQDSGAGEVTALLLRARRGDPHAAEELFEFVYQDLRRLARRQLAGKRPDATLSATALVHETYLRLARPGNLDQLDRNHFFAVAARAMRQIIVSDARQRRAVKRGEGAVRLELEDLHLAVDDKCEEILAVHEALDQLESLDSRLARLVELRYFAGLSSEETATVTGQSERGQRRDWAKARAFLLRSLENREAQP*