ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_8715_14

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 14917..16311

Top 3 Functional Annotations

Value Algorithm Source
Pilus retraction protein PilT Tax=Desulfovibrio sp. U5L RepID=I2Q4R9_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 338.0
  • Bit_score: 341
  • Evalue 1.10e-90
Pilus retraction protein PilT {ECO:0000313|EMBL:EIG54775.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 338.0
  • Bit_score: 341
  • Evalue 1.50e-90
twitching motility protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 345.0
  • Bit_score: 340
  • Evalue 5.20e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio sp. U5L → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGAGCGCCGACCTGCATCTTCTGGGGCGCCTGGCCGTCCACTACAAGCTGCTCTCCACCGAGCAGCTCCCCGAATCGACCCGCGCCCAGGCACGCAGCGCCGAACCCCGGCCGCTGGGCGAGCTGTGGATCGACGCCGGTTATCTGACGCGCGCTCAGCTCGAGAAACTCCTGGCGGTGCAGCGCGAGGTGGTCGCGAAGCAGAGCGGGCAGACTGCAGCGCCGCTCATTCAGCCCGCGCCCGCGGTCGATCTCGAGCAGACGGCGACCGGCGAGATCTCGACCCGTGCGGGCAAGCGCATCGATCGCATCCTCGAGTACGCCGTCTCGCAGCGCGCCAGCGACGTGCACATCATGAGTGGCGAGCGCGTCCTCCTGCGGCGTGACGGGCAGCTCGCCTTCGCCGGTGACGCGCCGCTCGAGCGCGGCCAGATCGAACGTCTCGTCGCCGAAGTCCTCGATCCGCGGTCGCGCGAGCTGCTCGATCGCGACGGCCAGACCGATTTTTCCTGGACGATCGCCGGGCGGGCGCGTTTCCGCGGCAACGCCTATCGTCACCAGCAGGGATTCGGCCTGGTGCTGCGTGCGATCGCCCTCGAGATTCCCACTCTCGCCAGCCTCGGCCTGCCGACGACGCTCGCCAAGCTCACCAACCACAATCAGGGACTGGTCCTGCTCACCGGTCCGGCCGGTTGCGGCAAGTCGTCGACGCTCGCCGCCCTCGTGCGGCTGATCAACGAGGAGCGCCAGGATCACATCGTCACCGTCGAGGATCCGATCGAATACCTGCACACGCCGCTGCGCTGCGTCGTCAATCAGCGCCAGGTGGGACGCGACACCGGCAGCTTCGCTCGCGCTCTCAAGGCCGCCCTGCGTGAGGATCCGGACGTCATCGCGATCGGCGAGCTGCGCGATCTCGAGACTATCTCGCTCGCGCTCACCGCCGCGGAGACGGGGCATCTGGTCCTTGCGACGCTGCACACCGGCAGCGCCGTCCGCACGGTGGACCGCGTCGTCGGCTCGTATCCGTCGAACCAGCAGGCCCAGATCCGGACGATGCTTTCGGAATCGCTGCGCGCCGTGGTCTCGCAACGTCTCGTGCGCCGCGCCGACGGCAGCGGGCGCGTGCCGGCGCTCGAGGTGCTCCTCGGCACTCGTGCGGTCTCGAACCTCATCCGCGAGTCGAAGACCTTCCAGATCCGTTCGATTCTCCAGACCGGCGGTTCCCAGGGCATGTGCCTGCTCGACATCTCGCTCGCGCGCCTCGTCAGGGAGGGCATCGTCAGCCGCGAAGAAGCGCTCTTGCATGCCGACGATTCGAAGCTCCTGCCGGCCGCCGTGGCCAGCGGCGCGCCGGCCGTACCTCCTGGAACCCCCGTAGCGGGCGACACTTGA
PROTEIN sequence
Length: 465
MSADLHLLGRLAVHYKLLSTEQLPESTRAQARSAEPRPLGELWIDAGYLTRAQLEKLLAVQREVVAKQSGQTAAPLIQPAPAVDLEQTATGEISTRAGKRIDRILEYAVSQRASDVHIMSGERVLLRRDGQLAFAGDAPLERGQIERLVAEVLDPRSRELLDRDGQTDFSWTIAGRARFRGNAYRHQQGFGLVLRAIALEIPTLASLGLPTTLAKLTNHNQGLVLLTGPAGCGKSSTLAALVRLINEERQDHIVTVEDPIEYLHTPLRCVVNQRQVGRDTGSFARALKAALREDPDVIAIGELRDLETISLALTAAETGHLVLATLHTGSAVRTVDRVVGSYPSNQQAQIRTMLSESLRAVVSQRLVRRADGSGRVPALEVLLGTRAVSNLIRESKTFQIRSILQTGGSQGMCLLDISLARLVREGIVSREEALLHADDSKLLPAAVASGAPAVPPGTPVAGDT*