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PLM4_65_b1_redo_sep16_scaffold_8715

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8715_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1..471
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI00035CABED
hyalin repeat protein
Uncharacterized protein {ECO:0000313|EMBL:ETW93363.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM4_65_b1_redo_sep16_scaffold_8715_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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598..1266
-----------------
DNA (669bp)
protein (223aa)
Transcriptional regulator, TetR family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJC6_KORVE
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABF43024.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_8715_3
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1270..2397
-----------------
DNA (1128bp)
protein (376aa)
Putative uncharacterized protein Tax=Leptospirillum ferrodiazotrophum RepID=C6HYQ8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES52343.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
efflux ABC transporter inner membrane protein
PLM4_65_b1_redo_sep16_scaffold_8715_4
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2412..3185
-----------------
DNA (774bp)
protein (258aa)
ABC transporter ATP-binding protein Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DHV2_THEEB
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAC09393.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus elongatus (strain BP-1).;"
PLM4_65_b1_redo_sep16_scaffold_8715_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3182..4084
-----------------
DNA (903bp)
protein (301aa)
Efflux transporter, RND family, MFP subunit Tax=Leptospirillum ferrodiazotrophum RepID=C6HYR0_9BACT
RND family efflux transporter MFP subunit
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_8715_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4189..6252)
-----------------
DNA (2064bp)
protein (688aa)
Predicted metallopeptidase Tax=Sorangium cellulosum (strain So ce56) RepID=A9F672_SORC5
metallopeptidase
Predicted metallopeptidase {ECO:0000313|EMBL:CAN91407.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM4_65_b1_redo_sep16_scaffold_8715_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6302..7672)
-----------------
DNA (1371bp)
protein (457aa)
Isopenicillin N epimerase bin=GWA2_Ignavibacteria_55_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
aminotransferase class V
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_8715_8
unknown

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comp(7683..7820)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8715_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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7957..8247
-----------------
DNA (291bp)
protein (97aa)
glutamate carboxypeptidase II (EC:3.4.17.21)
Glutamate carboxypeptidase II {ECO:0000313|EMBL:ABJ85541.1}; EC=3.4.17.21 {ECO:0000313|EMBL:ABJ85541.1};; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00035DFB5C
PLM4_65_b1_redo_sep16_scaffold_8715_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8448..10220
-----------------
DNA (1773bp)
protein (591aa)
Predicted aminopeptidase {ECO:0000313|EMBL:CDM64698.1}; EC=3.4.17.21 {ECO:0000313|EMBL:CDM64698.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glutamate carboxypeptidase II (EC:3.4.17.21)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00035DFB5C
PLM4_65_b1_redo_sep16_scaffold_8715_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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10352..11851
-----------------
DNA (1500bp)
protein (500aa)
Multi-sensor signal transduction histidine kinase Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RY34_HALTV
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_8715_12
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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11848..13941
-----------------
DNA (2094bp)
protein (698aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TX51_9CYAN
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_8715_13
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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14071..14901
-----------------
DNA (831bp)
protein (277aa)
prenyltransferase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4530D
menaquinone biosynthesis polyprenyltransferase
Tax=BJP_08E140C01_Clostridiales_46_19
PLM4_65_b1_redo_sep16_scaffold_8715_14
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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14917..16311
-----------------
DNA (1395bp)
protein (465aa)
Pilus retraction protein PilT Tax=Desulfovibrio sp. U5L RepID=I2Q4R9_9DELT
Pilus retraction protein PilT {ECO:0000313|EMBL:EIG54775.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
twitching motility protein
PLM4_65_b1_redo_sep16_scaffold_8715_15
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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16323..17387
-----------------
DNA (1065bp)
protein (355aa)
Twitching motility protein Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K4H4_DESAC
twitching motility protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_65_b1_redo_sep16_scaffold_8715_16
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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17481..18011
-----------------
DNA (531bp)
protein (177aa)
Putative phosphatidylglycerophosphatase B (PgpB) {ECO:0000313|EMBL:CDH43188.1}; EC=3.1.3.27 {ECO:0000313|EMBL:CDH43188.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Phosphoesterase PA-phosphatase related protein Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E792_9GAMM
PA-phosphatase-like phosphoesterase
PLM4_65_b1_redo_sep16_scaffold_8715_17
CG_Proteo_01, Proteobacteria, Bacteria

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18372..18776
-----------------
DNA (405bp)
protein (135aa)
Glycosyl transferase group 1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DJG3_9GAMM
glycosyl transferase family 1
Tax=CG_Proteo_01
Displaying 17 items

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