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PLM4_65_b1_redo_sep16_scaffold_9199_3

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 2177..3061

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH87_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 270.0
  • Bit_score: 196
  • Evalue 2.10e-47
small-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 254.0
  • Bit_score: 167
  • Evalue 5.00e-39
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 270.0
  • Bit_score: 196
  • Evalue 2.90e-47

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 885
TTGGGGTTTTCCGCGCAGACGGCGGCCGAGAGCGCCGAACGCCTGCGCGACGGCCTGCGTGATGCCCCGCACGATCTCCAGGCGGTCCTGCAGCAGCTCGTCGACGGCTTCTTCCGGCACCTGCCGGGAGTGCTCGCCGGAATCCTGATCCTGCTGCTGTTCTACGGCCTGTCGCGCCTCGCGGTGCGCCTCGTCCGCCGGTTGGCGGAGCGGGCGCGCTCCGACGAGACGTTAGGAGAACTGCTCGTCGCCCTGGCGCGCTTCACGGTGCTCGCGACCGGCGTCCTCATGGCGCTCGACCAGATGGGCTTCGAAGTGCGTTCGTTGATCGCCGGTCTCGGCATCGCGGGCCTCGCCGTGGGTCTGGCCGCGCAGGAGACGATGGCGAACGTCTTCGCCGGCTTCGCGATCCTCTGGGATCACCCGTTCCGCGTCGGAGACACCGTGACGATGGCCGGCAATCAGGGGCAGGTGAGCGCGATCGGAATGCGCTCGATCCGCCTCCGGACCTTCGACCAGCGCGAAGTGATTCTGCCGAACAAGGACGTCATTCAGCAGCCGATCGTCAACCATTCACGCTATCCGGCGATGCGCGTCGACGCCGCGGTCGCGGTCGCTTACGGCGTCGCGGTCGAGCGCGTGCGCGAAGTGTTGATCGCGGCGGCGCGGAGCGAGCTGCCGATTCTCGAGCAGCCGGAGCCGCAGGTGGTCGTGACCGCTCTCGGCGAGTCCGGAGTCACCGTCGAGCTCAGGGTCTGGGTGGCTGACCCACTCGCTTCCGCGACCTCGCGCTTTCGCCTCCTCGAGGTCGTAAAGCGGGCGCTGGACGACGCCGGGATCGAGATTCCCTACCCGCAGCGCGTGGTGCGCGTGGTCGAGCGTTGA
PROTEIN sequence
Length: 295
LGFSAQTAAESAERLRDGLRDAPHDLQAVLQQLVDGFFRHLPGVLAGILILLLFYGLSRLAVRLVRRLAERARSDETLGELLVALARFTVLATGVLMALDQMGFEVRSLIAGLGIAGLAVGLAAQETMANVFAGFAILWDHPFRVGDTVTMAGNQGQVSAIGMRSIRLRTFDQREVILPNKDVIQQPIVNHSRYPAMRVDAAVAVAYGVAVERVREVLIAAARSELPILEQPEPQVVVTALGESGVTVELRVWVADPLASATSRFRLLEVVKRALDDAGIEIPYPQRVVRVVER*