ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_9199

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9199_1
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..709
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YD92_SORCE
Uncharacterized protein {ECO:0000313|EMBL:KIG12009.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_9199_2
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(817..2103)
-----------------
DNA (1287bp)
protein (429aa)
Membrane protein involved in aromatic hydrocarbon degradation Tax=Caldithrix abyssi DSM 13497 RepID=H1XRP9_9BACT
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EHO41259.1}; Flags: Precursor;; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
aromatic hydrocarbon degradation membrane protein
PLM4_65_b1_redo_sep16_scaffold_9199_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2177..3061
-----------------
DNA (885bp)
protein (295aa)
MscS Mechanosensitive ion channel Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH87_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
small-conductance mechanosensitive channel
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_9199_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

3110..3451
-----------------
DNA (342bp)
protein (114aa)
Anti-sigma factor antagonist Tax=Micromonospora RepID=D9T7H8_MICAI
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
anti-anti-sigma factor
PLM4_65_b1_redo_sep16_scaffold_9199_5
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3542..4984
-----------------
DNA (1443bp)
protein (481aa)
Uncharacterized protein Tax=Nodularia spumigena CCY9414 RepID=A0ZLE9_NODSP
Cytokinin oxidase {ECO:0000313|EMBL:AHJ27793.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
oxygen-dependent FAD-linked oxidoreductase
PLM4_65_b1_redo_sep16_scaffold_9199_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5007..6008
-----------------
DNA (1002bp)
protein (334aa)
ddlA; putative D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase Tax=Pseudomonas psychrotolerans L19 RepID=H0JEF6_9PSED
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_9199_7
unknown

Not on your lists

comp(6095..7474)
-----------------
DNA (1380bp)
protein (460aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9199_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7647..8492
-----------------
DNA (846bp)
protein (282aa)
Putative uncharacterized protein Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWG4_SULAA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_9199_9
Cobetia marina, Cobetia, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8527..9192
-----------------
DNA (666bp)
protein (222aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Cobetia.;" source="Cobetia marina (Deleya marina).;"
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI0003801C2D
phosphoglycolate phosphatase
PLM4_65_b1_redo_sep16_scaffold_9199_10
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9186..10271)
-----------------
DNA (1086bp)
protein (362aa)
peptidase, m1 (aminopeptidase n) family (EC:3.4.11.-)
Peptidase, M1 (Aminopeptidase N) family {ECO:0000313|EMBL:ADO68428.1}; EC=3.4.11.- {ECO:0000313|EMBL:ADO68428.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Peptidase, M1 (Aminopeptidase N) family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FUZ0_STIAD
Displaying 10 items

View Taxonomy