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PLM4_65_b1_redo_sep16_scaffold_10421_7

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 8374..9177

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 267.0
  • Bit_score: 191
  • Evalue 8.50e-46
tRNA pseudouridine synthase A Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P1A7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 267.0
  • Bit_score: 191
  • Evalue 6.10e-46
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 267.0
  • Bit_score: 188
  • Evalue 1.90e-45

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Taxonomy

Thermaerobacter subterraneus → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 804
ATGGGTCTCTCGCTCCCCCCGGACGACCGGGCGCGCAACCACGCCGTGGCGCCCGGTCTCTACCGCTATCGCCTCGACATCGCCTACCTTGGCTCCGGCTTCGGCGGCTGGCAGCGGCAACCCAACGCCGAGACCGTCCAGGAGCGGCTGGAGGTCGCGCTTTCGGACCTCCTCGGCGAAAGCGTCGCGGTGGTCGGAGCGAGCCGGACGGACGCCGGCGTGCATGCCCGCGCCCAGGTGGCGCACGTCGATCTCACCCGTCCGTTCTCGAGCCGGGGCCTGGTCTTCGGAACCAATCATCGTCTGCCGCGCGCGATCCGGGTTCTCGCGGCCGGTCTCGCGCCGGAGGGGTTTCATGCCCGCTTCTCCGCCACCGCGAAGGAATACGCCTATCGCATCCATCCGGGACGCTTCGCGCCACCGGATCTCGCACCCTTCGTCCTCGCGGTCCCCGATCGGCTCGATCTCGACCGGCTGCGGGCGGCGACCCTGAGGCTCCCCGGCAAGCACGACTTCTCCTGCTTCGCTCTCGCCGGTGGCAGCCACAGCTCGCCGATCCGGACTCTCTTTCGAGCCGCCTGGGAGGGCGAGACCTCCGGTCTCACGTTGCGCCTCACCGGCGACGGCTTTCTGCGCGGCATGGTGCGCGGACTCGTGGGGACGCTCCTCGAAGTCGCTTTCGGTCGACGCACGCCGGCAAGTTTCGCGGCCCTGCTCGCGGGCGGCGAGCGCGGCGCGGCGGGCCCGACTGCCCCCGCCCACGCGCTGGCCCTCGAACGCATCGACTACGGTCCTCCCGCCTGA
PROTEIN sequence
Length: 268
MGLSLPPDDRARNHAVAPGLYRYRLDIAYLGSGFGGWQRQPNAETVQERLEVALSDLLGESVAVVGASRTDAGVHARAQVAHVDLTRPFSSRGLVFGTNHRLPRAIRVLAAGLAPEGFHARFSATAKEYAYRIHPGRFAPPDLAPFVLAVPDRLDLDRLRAATLRLPGKHDFSCFALAGGSHSSPIRTLFRAAWEGETSGLTLRLTGDGFLRGMVRGLVGTLLEVAFGRRTPASFAALLAGGERGAAGPTAPAHALALERIDYGPPA*