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PLM4_65_b1_redo_sep16_scaffold_4165

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4165_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..553
DNA (552bp) protein (184aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_4165_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(672..1001)
DNA (330bp) protein (110aa)
UPF0145 protein Rmar_1926 Tax=Rhodothermus marinus RepID=D0MK97_RHOM4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_4165_3
Bacillus marmarensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1095..3173
DNA (2079bp) protein (693aa)
Sodium:proton antiporter Tax=Bacillus marmarensis DSM 21297 RepID=U6SMF6_9BACI
Sodium:proton antiporter {ECO:0000313|EMBL:ERN52879.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus marmarensis DSM 21297.;"
napA; Na+/H+ antiporter CPA2 family
PLM4_65_b1_redo_sep16_scaffold_4165_4
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3170..3385
DNA (216bp) protein (72aa)
Phosphotransferase system enzyme II Tax=Rhodococcus pyridinivorans AK37 RepID=H0JNX7_9NOCA
PTS lactose transporter subunit IIC
PTS lactose transporter subunit IIC {ECO:0000313|EMBL:AHD19487.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
PLM4_65_b1_redo_sep16_scaffold_4165_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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3412..4740
DNA (1329bp) protein (443aa)
Peptidase S41 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0C3_ISOPI
peptidase S41
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_4165_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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4779..5537
DNA (759bp) protein (253aa)
hypothetical protein bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_4165_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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5743..6633
DNA (891bp) protein (297aa)
Putative thiosulfate sulfurtransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3N9_CALAS
putative thiosulfate sulfurtransferase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM4_65_b1_redo_sep16_scaffold_4165_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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6630..7103
DNA (474bp) protein (158aa)
SUF system FeS assembly protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATZ0_RUBXD
SUF system FeS assembly protein
SUF system FeS assembly protein {ECO:0000313|EMBL:ABG05138.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM4_65_b1_redo_sep16_scaffold_4165_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7166..9262
DNA (2097bp) protein (699aa)
Putative S9C family peptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A855_GEMAT
WD40-like beta Propeller containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_4165_10
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9263..10048
DNA (786bp) protein (262aa)
Transcriptional regulator, AraC family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VV5_STIAD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EAU64597.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_4165_11
unknown

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10125..10652
DNA (528bp) protein (176aa)
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4165_12
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10837..11679
DNA (843bp) protein (281aa)
Putative uncharacterized protein Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RIC3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA73893.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 44266 / VH2).;"
PLM4_65_b1_redo_sep16_scaffold_4165_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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11780..12583
DNA (804bp) protein (268aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB70_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_4165_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12638..13135)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035E8FDB
DinB family protein
DinB family protein {ECO:0000313|EMBL:AHG92790.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_4165_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13132..14619)
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=Salinibacter ruber (strain M8) RepID=D5H5G2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23267.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
PLM4_65_b1_redo_sep16_scaffold_4165_trna_1
unknown

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14730..14801
DNA (72bp)
transferRNA Cys
PLM4_65_b1_redo_sep16_scaffold_4165_16
unknown

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15178..15450
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying 17 items

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