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PLM4_65_b1_redo_sep16_scaffold_20752

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_20752_1
unknown

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comp(3..161)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_20752_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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396..911
DNA (516bp) protein (172aa)
TnpA Tax=Pseudomonas aeruginosa RepID=Q49HG0_PSEAI
transposase IS116/IS110/IS902 family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_20752_3
unknown

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comp(1178..1678)
DNA (501bp) protein (167aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_20752_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(1917..2231)
DNA (315bp) protein (105aa)
integron integrase
integron integrase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_20752_5
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

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2329..3177
DNA (849bp) protein (283aa)
hypothetical protein bin=CD_OP8_4m species=Gracilimonas tropica genus=Gracilimonas taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tetratricopeptide TPR_2 repeat-containing protein
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
PLM4_65_b1_redo_sep16_scaffold_20752_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3145..4107)
DNA (963bp) protein (321aa)
PREDICTED: serine racemase-like isoform X3 Tax=Aplysia californica RepID=UPI0003593F8F
Pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG92280.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_20752_7
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4094..5101)
DNA (1008bp) protein (336aa)
Ornithine cyclodeaminase/mu-crystallin Tax=Desulfococcus multivorans DSM 2059 RepID=S7U718_DESML
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:EPR44920.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_20752_8

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comp(5131..6282)
DNA (1152bp) protein (384aa)
epimerase Tax=Arenimonas oryziterrae RepID=UPI0003B34722
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49271.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_20752_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6443..7102
DNA (660bp) protein (220aa)
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AHG88897.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 9 items

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