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PLM4_65_b1_redo_sep16_scaffold_1116

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1116_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2..214
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD3_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_1116_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

403..1020
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD3_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_1116_3
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1032..1733)
DNA (702bp) protein (234aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00035CDD25
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ81991.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM4_65_b1_redo_sep16_scaffold_1116_4
unknown

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comp(1942..2547)
DNA (606bp) protein (202aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1116_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2668..3237
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD3_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_1116_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3446..3781)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70124.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1116_7
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3771..4274)
DNA (504bp) protein (168aa)
DNA polymerase beta domain protein region Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK1_9BACT
DNA polymerase beta domain-containing protein region
Tax=RBG_16_Chloroflexi_57_8_curated
PLM4_65_b1_redo_sep16_scaffold_1116_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4342..4821)
DNA (480bp) protein (160aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribonuclease VapC Tax=uncultured candidate division OP1 bacterium RepID=H5STH1_9BACT
UPF0129 protein
PLM4_65_b1_redo_sep16_scaffold_1116_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4853..5359
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD3_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_1116_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5425..6021
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX08718.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM4_65_b1_redo_sep16_scaffold_1116_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6185..6928
DNA (744bp) protein (248aa)
Exodeoxyribonuclease III Xth Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHX1_ANADF
exodeoxyribonuclease III Xth
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_1116_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7475..7933
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEY9_RHOMR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_1116_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8070..10076)
DNA (2007bp) protein (669aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent outer membrane receptor for cobalamin and Fe transport
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1116_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

10104..11300
DNA (1197bp) protein (399aa)
major facilitator superfamily protein Tax=Bacillus sp. m3-13 RepID=UPI0001E89BF0 bin=16ft_combo_ws3_JS1 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
major facilitator superfamily protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_1116_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11272..12426)
DNA (1155bp) protein (385aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88386.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_1116_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12611..13600
DNA (990bp) protein (330aa)
Hpr(Ser) kinase/phosphatase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S15_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88376.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_1116_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

13810..15318
DNA (1509bp) protein (503aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXX7_SOLCM
Elongator protein 3/MiaB/NifB
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1116_18
unknown

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comp(15404..15538)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1116_19
unknown

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comp(15559..15750)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1116_20
unknown

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comp(15845..16033)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1116_21
unknown

Not on your lists

comp(16127..16405)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1116_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16408..17040)
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1116_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17037..18032)
DNA (996bp) protein (332aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1116_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18050..19645)
DNA (1596bp) protein (532aa)
Stk1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Q1_THERP
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1116_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19642..21282)
DNA (1641bp) protein (547aa)
Ig domain protein group 2 domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1116_26
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21315..21674)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JNB7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESQ13795.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
PLM4_65_b1_redo_sep16_scaffold_1116_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21671..24223)
DNA (2553bp) protein (851aa)
Penicillin amidase family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC63_GEMAT
penicillin amidase family protein
Penicillin amidase family protein {ECO:0000313|EMBL:BAH40090.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_1116_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(24223..25455)
DNA (1233bp) protein (411aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lewinella cohaerens genus=Lewinella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1116_29
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(25452..26342)
DNA (891bp) protein (297aa)
hypothetical protein Tax=Microbulbifer variabilis RepID=UPI000368C90A
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM4_65_b1_redo_sep16_scaffold_1116_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26452..27177
DNA (726bp) protein (242aa)
gme:Gmet_1782 integral membrane protein TerC bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
TerC family membrane protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying items 1-30 of 32 in total

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