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PLM4_65_b1_redo_sep16_scaffold_2590

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2590_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141..656)
DNA (516bp) protein (172aa)
Putative uncharacterized protein Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VL66_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG11239.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
PLM4_65_b1_redo_sep16_scaffold_2590_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(701..1168)
DNA (468bp) protein (156aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_2590_3
unknown

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comp(1231..1668)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2590_4
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1831..2877
DNA (1047bp) protein (349aa)
UPF0219 protein Msm_1561 bin=GWF2_Ignavibacteria_35_20 species=Methanobrevibacter smithii genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2892..4040
DNA (1149bp) protein (383aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Beta-ketoacyl synthase/thiolase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4044..4436
DNA (393bp) protein (131aa)
hypothetical protein; K07068 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
AcaC
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4456..4632
DNA (177bp) protein (59aa)
id=24595421 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4634..5860)
DNA (1227bp) protein (409aa)
Putative Fe-S oxidoreductase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AK09_IGNAJ
Fe-S oxidoreductase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2590_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6187..6510
DNA (324bp) protein (108aa)
Transcriptional regulator, ArsR family Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKI4_SORC5
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CAN96589.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM4_65_b1_redo_sep16_scaffold_2590_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6529..6957
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EMI6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:AKF03191.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
activator of Hsp90 ATPase 1 family protein
PLM4_65_b1_redo_sep16_scaffold_2590_11
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

6957..7505
DNA (549bp) protein (183aa)
hypothetical protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_16_OP11_45_19_curated
PLM4_65_b1_redo_sep16_scaffold_2590_12
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7925..8710
DNA (786bp) protein (262aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI000368C20D
histidine kinase
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_2590_13
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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8837..9391
DNA (555bp) protein (185aa)
L-glyceraldehyde 3-phosphate reductase Tax=Deinococcus aquatilis RepID=UPI000364E287
oxidoreductase, aryl-alcohol dehydrogenase like protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM4_65_b1_redo_sep16_scaffold_2590_14
unknown

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comp(9397..10236)
DNA (840bp) protein (280aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2590_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10392..12260
DNA (1869bp) protein (623aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2590_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12257..13261
DNA (1005bp) protein (335aa)
2-oxoglutarate oxidoreductase, beta subunit Tax=alpha proteobacterium JLT2015 RepID=M2TQ96_9PROT
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_17
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(13591..14670)
DNA (1080bp) protein (360aa)
antifreeze-like protein bin=RBG_19FT_COMBO_GAL15_69_19 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
antifreeze-like protein
Tax=RBG_16_Acidobacteria_64_8_curated
PLM4_65_b1_redo_sep16_scaffold_2590_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14935..15789
DNA (855bp) protein (285aa)
XRE family transcriptional regulator bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2590_19
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15805..17739)
DNA (1935bp) protein (645aa)
Uncharacterized protein Tax=Flavobacteriales bacterium ALC-1 RepID=A8UMI2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP70864.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
PLM4_65_b1_redo_sep16_scaffold_2590_20
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17766..18704)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Microbacterium maritypicum MF109 RepID=T5KMC3_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:KGM56717.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
GntR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_2590_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19337..19816
DNA (480bp) protein (160aa)
Putative uncharacterized protein Tax=Gordonia araii NBRC 100433 RepID=G7GZ58_9ACTO
protein of unknown function DUF820
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_22
unknown

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comp(19885..19986)
DNA (102bp) protein (34aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2590_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20057..20881)
DNA (825bp) protein (275aa)
Putative uncharacterized protein Tax=Opitutaceae bacterium TAV5 RepID=H1IVE3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20872..21135)
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J1Z0_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2590_25
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21292..22614)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein Tax=Janthinobacterium lividum RepID=A0SZ27_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAO39633.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
PLM4_65_b1_redo_sep16_scaffold_2590_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22909..23511
DNA (603bp) protein (201aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002E1747C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47817.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
PLM4_65_b1_redo_sep16_scaffold_2590_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

23543..25150
DNA (1608bp) protein (536aa)
X-Pro dipeptidyl-peptidase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7C6_CONWI
X-Pro dipeptidyl-peptidase domain-containing protein
X-Pro dipeptidyl-peptidase domain protein {ECO:0000313|EMBL:ADB48897.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM4_65_b1_redo_sep16_scaffold_2590_28
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(25161..26303)
DNA (1143bp) protein (381aa)
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
PLM4_65_b1_redo_sep16_scaffold_2590_29
unknown

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26476..26577
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 29 items

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