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PLM4_65_b1_redo_sep16_scaffold_2624

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2624_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..2136)
DNA (2136bp) protein (712aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037842C0
mmpL; hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2624_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2310..3053
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:AHG89655.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2624_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3214..4659)
DNA (1446bp) protein (482aa)
peptidase M28 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC98
aminopeptidase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2624_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4710..5822
DNA (1113bp) protein (371aa)
Beta-lactamase family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC30_GEMAT
beta-lactamase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2624_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5905..6204
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2624_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6350..7504)
DNA (1155bp) protein (385aa)
Putative ribonuclease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2624_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7776..8975
DNA (1200bp) protein (400aa)
Alpha/beta hydrolase fold Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E601_GEOLS
alpha/beta hydrolase fold protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2624_8
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8972..9397
DNA (426bp) protein (142aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000360D816
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY41160.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
PLM4_65_b1_redo_sep16_scaffold_2624_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9402..9776
DNA (375bp) protein (125aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9T5_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH39262.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_2624_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9785..10423
DNA (639bp) protein (213aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
cyclophilin Tax=Thiobacillus denitrificans RepID=UPI000362CFED
Tax=GWE1_Thiobacillus_62_9_curated
PLM4_65_b1_redo_sep16_scaffold_2624_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10425..10991
DNA (567bp) protein (189aa)
CMP/dCMP deaminase, zinc-binding Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW74_ROSS1
CMP/dCMP deaminase zinc-binding protein
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:AHG91988.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2624_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10984..11223
DNA (240bp) protein (80aa)
Putative N-acetyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVK6_RUBGI
putative N-acetyltransferase
Putative N-acetyltransferase {ECO:0000313|EMBL:BAL97043.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
PLM4_65_b1_redo_sep16_scaffold_2624_13
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11285..12319
DNA (1035bp) protein (345aa)
Oxidoreductase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U702_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF84833.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
oxidoreductase
PLM4_65_b1_redo_sep16_scaffold_2624_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12316..12807)
DNA (492bp) protein (164aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2624_15
unknown

Not on your lists

comp(12952..13350)
DNA (399bp) protein (133aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2624_16
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(13471..13785)
DNA (315bp) protein (105aa)
hypothetical protein Tax=Balneola vulgaris RepID=UPI000373418D
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM4_65_b1_redo_sep16_scaffold_2624_17
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14018..14236)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSU9_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFE72116.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2624_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14242..14565)
DNA (324bp) protein (108aa)
Cupin region bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cupin
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_2624_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14577..16478)
DNA (1902bp) protein (634aa)
aehA; alpha-amino acid ester hydrolase (EC:3.1.1.43)
Alpha-amino acid ester hydrolase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACX2_GEMAT
Putative hydrolase, CocE/NonD family {ECO:0000313|EMBL:CDM65259.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_2624_20
unknown

Not on your lists

16686..17018
DNA (333bp) protein (111aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2624_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17028..18743)
DNA (1716bp) protein (572aa)
hypothetical protein; K07047 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Amidohydrolase 3
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2624_22
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

18849..19286
DNA (438bp) protein (146aa)
Uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
PLM4_65_b1_redo_sep16_scaffold_2624_23
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19307..20239
DNA (933bp) protein (311aa)
hypothetical protein Tax=Kordiimonas gwangyangensis RepID=UPI00036718F3
Hydrolase {ECO:0000313|EMBL:GAM98577.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
beta-lactamase domain protein
PLM4_65_b1_redo_sep16_scaffold_2624_24
unknown

Not on your lists

20308..20547
DNA (240bp) protein (80aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2624_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(20632..20901)
DNA (270bp) protein (90aa)
hypothetical protein bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_2624_26
unknown

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comp(20902..21093)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2624_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21128..22954)
DNA (1827bp) protein (609aa)
Gll3143 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NGM5_GLOVI
peptidase M2 peptidyl-dipeptidase A
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_2624_28
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22999..23877)
DNA (879bp) protein (293aa)
Xaa-Pro aminopeptidase-like protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBX1_MYXSD
WD40-like Beta Propeller Repeat {ECO:0000313|EMBL:GAO02153.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
Xaa-Pro aminopeptidase-like protein
PLM4_65_b1_redo_sep16_scaffold_2624_29
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(23947..24267)
DNA (321bp) protein (107aa)
metal-binding protein bin=bin1_lowGC species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
CopG protein
Tax=CSP1_2_Dadabacteria
PLM4_65_b1_redo_sep16_scaffold_2624_30
unknown

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comp(24286..24417)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 30 items

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