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PLM4_65_b1_redo_sep16_scaffold_2842

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2842_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3..1778)
DNA (1776bp) protein (592aa)
hypothetical protein; K06888 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2842_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1844..2509)
DNA (666bp) protein (222aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI43_CHLTF
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2842_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2506..4227)
DNA (1722bp) protein (574aa)
DNA polymerase X family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R8_GEMAT
PHP domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2842_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4241..4906)
DNA (666bp) protein (222aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_2842_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4903..5325)
DNA (423bp) protein (141aa)
Putative hydrolase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAH37580.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_2842_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5325..5789)
DNA (465bp) protein (155aa)
GAF sensor protein; K07170 GAF domain-containing protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
GAF domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_2842_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5779..7038)
DNA (1260bp) protein (420aa)
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG89985.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28 bin=CNBR_ACIDO species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PLM4_65_b1_redo_sep16_scaffold_2842_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7124..8602
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2842_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8718..10292
DNA (1575bp) protein (525aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2842_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10440..10787
DNA (348bp) protein (116aa)
Toxin-antitoxin system antitoxin component family Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A243_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_2842_11
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10788..11255
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Magnetospirillum sp. SO-1 RepID=M2Z6I4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME69925.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
RES domain protein
PLM4_65_b1_redo_sep16_scaffold_2842_12
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(11315..12382)
DNA (1068bp) protein (356aa)
Peptidase M42 family protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ABU56365.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM4_65_b1_redo_sep16_scaffold_2842_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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12504..14528
DNA (2025bp) protein (675aa)
Putative membrane protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2842_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14589..14969
DNA (381bp) protein (127aa)
Uncharacterized protein bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2842_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14983..16437
DNA (1455bp) protein (485aa)
Aminoacyl-histidine dipeptidase bin=GWA2_Ignavibacteriae_54_16_partial species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
aminoacyl-histidine dipeptidase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2842_16
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(16434..17600)
DNA (1167bp) protein (389aa)
Butyryl-CoA dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SIT0_9BACT
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:BAL56066.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
acyl-coenzyme A dehydrogenase, short/branched chain
PLM4_65_b1_redo_sep16_scaffold_2842_17
unknown

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comp(17678..18757)
DNA (1080bp) protein (360aa)

This feature has no annotations

Displaying 17 items

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