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PLM4_65_b1_redo_sep16_scaffold_1438_14

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: 14404..14946

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 175.0
  • Bit_score: 193
  • Evalue 1.80e-46
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 179.0
  • Bit_score: 222
  • Evalue 8.00e-56
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 179.0
  • Bit_score: 234
  • Evalue 7.70e-59

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 543
GTGGACGAACGACACCTGATCGCACGAGTGCTCGCCGGGGACCCGGCCGCGGAGCGGGAGCTGTACGAAGCCCACGTGGACCGCGTGTACCGGCTGGCGTTCCGCATGACGGGCGACGACGCCCAGGCGCAGGACTGTACTCAGGACACGTTCGTGCGGGTGTTCGATCGGCTGAAGGAGTTCCGCGGGGAGGCGGCGTTGAGCACCTGGATCTACACGGTCGCGACCTCGGTCGTCCTCAACAGCCTCCGGACCGTGAAGCGGATCCGCGGACGGGAGATGCCGGAAGAGGCGGCGGCCAACCTGGGCCATCTGCCTCGGCGGGCCGAACCCGATCTCAAGCGCCGGCTGCGGGATGCCATCGAAGGCCTGCCGGCCAAGCTGAGGATGGTCTTCGTGATGCACGACGTCGAGGGATACACACATGACGAGATTGGCGGCGCGCTGGGCGTGCCGGTGGGCACGTCCAAGGCCCAGCTGTTCCGGGCGCGGGCCCGCCTGAGAGAAGCCTTGGCCGACTTCGCGGGGGAATGGGCCGTATGA
PROTEIN sequence
Length: 181
VDERHLIARVLAGDPAAERELYEAHVDRVYRLAFRMTGDDAQAQDCTQDTFVRVFDRLKEFRGEAALSTWIYTVATSVVLNSLRTVKRIRGREMPEEAAANLGHLPRRAEPDLKRRLRDAIEGLPAKLRMVFVMHDVEGYTHDEIGGALGVPVGTSKAQLFRARARLREALADFAGEWAV*