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PLM4_65_b1_redo_sep16_scaffold_1438

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1438_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..418)
DNA (417bp) protein (139aa)
Phosphoesterase PA-phosphatase related protein Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TDE1_9CLOT
PA-phosphatase-like phosphoesterase
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:ABS24640.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_1438_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(418..1248)
DNA (831bp) protein (277aa)
type I phosphodiesterase/nucleotide pyrophosphatase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=CG_Arma_01
PLM4_65_b1_redo_sep16_scaffold_1438_3
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1236..2384)
DNA (1149bp) protein (383aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EGL19427.1}; EC=2.4.-.- {ECO:0000313|EMBL:EGL19427.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
Glycosyltransferase, group 1 family protein Tax=Paenibacillus RepID=F5LDY5_9BACL
glycosyltransferase
PLM4_65_b1_redo_sep16_scaffold_1438_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2529..4208)
DNA (1680bp) protein (560aa)
Phosphate regulon sensor protein PhoR Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_1438_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4235..4942)
DNA (708bp) protein (236aa)
Phosphate regulon transcriptional regulatory protein PhoB Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5077..5700
DNA (624bp) protein (208aa)
Putative phosphate transport regulator
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_65_b1_redo_sep16_scaffold_1438_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5697..6734
DNA (1038bp) protein (346aa)
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
pit; low-affinity inorganic phosphate transporter
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_65_b1_redo_sep16_scaffold_1438_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6787..9885
DNA (3099bp) protein (1033aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16)
2',3'-cyclic-nucleotide 2'-phosphodiesterase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ3_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_1438_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9902..10924
DNA (1023bp) protein (341aa)
add; adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:BAH39397.1}; EC=3.5.4.4 {ECO:0000313|EMBL:BAH39397.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Adenosine deaminase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ1_GEMAT
PLM4_65_b1_redo_sep16_scaffold_1438_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10921..12291
DNA (1371bp) protein (457aa)
Nucleoside transporter Tax=uncultured marine bacterium Ant4D5 RepID=Q2PY00_9BACT
Na+ dependent nucleoside transporter domain-containing protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
PLM4_65_b1_redo_sep16_scaffold_1438_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12327..13130
DNA (804bp) protein (268aa)
Purine nucleoside phosphorylase Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X3_9BACL
purine nucleoside phosphorylase I
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_1438_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13619..14017)
DNA (399bp) protein (133aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_13
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14014..14250)
DNA (237bp) protein (79aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PLM4_65_b1_redo_sep16_scaffold_1438_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14404..14946
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14943..15602
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15602..17089
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1438_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17086..17874
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI1_GEMAT
PBS lyase HEAT domain protein repeat-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1438_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17947..19389
DNA (1443bp) protein (481aa)
Peptidase M48 Ste24p Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB62_ANADF
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ABS25958.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_1438_19
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19469..19846
DNA (378bp) protein (126aa)
hypothetical protein Tax=Synechococcus sp. PCC 7336 RepID=UPI0003496355
Uncharacterized protein {ECO:0000313|EMBL:CCD90991.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1438_20
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19965..21572
DNA (1608bp) protein (536aa)
PppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing Tax=Geobacter sulfurreducens RepID=D7AKU2_GEOSK
Exopolyphosphatase {ECO:0000313|EMBL:KIE41594.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
gppA-2; pppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing
PLM4_65_b1_redo_sep16_scaffold_1438_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21601..23037)
DNA (1437bp) protein (479aa)
metal-binding protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000367A718
CHAD domain containing protein
CHAD domain containing protein {ECO:0000313|EMBL:AHG91533.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_1438_22
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23030..23539)
DNA (510bp) protein (170aa)
SCO2-like protein Tax=sulfur-oxidizing symbionts RepID=G2DBY5_9GAMM
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EGV51874.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
putative phosphohistidine phosphatase SixA
PLM4_65_b1_redo_sep16_scaffold_1438_23
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(23588..25054)
DNA (1467bp) protein (489aa)
HAD family hydrolase 5-nucleotidase bin=GWB1_Deltaproteobacteria_rel_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
HAD family hydrolase
Tax=GWB1_Bdellovibrionales_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_1438_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25051..25851)
DNA (801bp) protein (267aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7)
phosphomethylpyrimidine kinase Tax=Meiothermus timidus RepID=UPI000377A00C
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25909..26679
DNA (771bp) protein (257aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIV1_THEM7
tRNA/rRNA methyltransferase (SpoU)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26669..27454
DNA (786bp) protein (262aa)
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27503..28090
DNA (588bp) protein (196aa)
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor bin=GWC2_Ignavibacteria_56_12 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1438_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28087..28770
DNA (684bp) protein (228aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1438_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28788..29639
DNA (852bp) protein (284aa)
hypothetical protein bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1438_30

Not on your lists

29659..30450
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AIA11718.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF4098
Displaying items 1-30 of 42 in total

View Taxonomy