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PLM4_65_b1_redo_sep16_scaffold_15925

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_15925_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..525
DNA (525bp) protein (175aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Transcription-repair-coupling factor Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE
transcription-repair coupling factor
PLM4_65_b1_redo_sep16_scaffold_15925_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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713..1861
DNA (1149bp) protein (383aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Chaperone surA Tax=Halomonas sp. A3H3 RepID=T2LAB6_9GAMM
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM4_65_b1_redo_sep16_scaffold_15925_3
Bacillus pseudofirmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1962..2237
DNA (276bp) protein (92aa)
S4 domain RNA binding heat shock protein, YabO Tax=Bacillus pseudofirmus (strain OF4) RepID=D3FR15_BACPE
yabO; S4 domain-containing RNA binding heat shock protein YabO
S4 domain RNA binding heat shock protein, YabO {ECO:0000313|EMBL:ADC49711.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pseudofirmus (strain OF4).;"
PLM4_65_b1_redo_sep16_scaffold_15925_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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2458..3093
DNA (636bp) protein (212aa)
Uncharacterized protein conserved in bacteria Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLC1_CHLTF
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:AEP13396.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_15925_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3177..4178
DNA (1002bp) protein (334aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tRNA-dihydrouridine synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJH2_CHLTF
putative TIM-barrel protein, nifR3 family
PLM4_65_b1_redo_sep16_scaffold_15925_6

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4350..4934
DNA (585bp) protein (195aa)
Dihydrofolate reductase family protein Tax=uncultured bacterium RepID=L7Y0N0_9BACT
Dihydrofolate reductase family protein {ECO:0000313|EMBL:AGD93301.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bifunctional deaminase-reductase domain protein
PLM4_65_b1_redo_sep16_scaffold_15925_7

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comp(5026..6483)
DNA (1458bp) protein (486aa)
Uncharacterized protein Tax=uncultured soil bacterium RepID=L0MPL7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGB85075.1}; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
PLM4_65_b1_redo_sep16_scaffold_15925_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6553..6807)
DNA (255bp) protein (85aa)
Transcriptional regulator, effector-binding domain/component Tax=Bradyrhizobium sp. YR681 RepID=J3HZJ7_9BRAD
Transcriptional regulator, effector-binding domain/component {ECO:0000313|EMBL:EJN10656.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
extracellular solute-binding protein
PLM4_65_b1_redo_sep16_scaffold_15925_9

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comp(7047..7430)
DNA (384bp) protein (128aa)
PepM Tax=uncultured soil bacterium RepID=L0MLH7_9BACT
PepM {ECO:0000313|EMBL:AGB85074.1}; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
M23/M37 family peptidase
PLM4_65_b1_redo_sep16_scaffold_15925_10

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comp(7803..9044)
DNA (1242bp) protein (414aa)
PndS Tax=uncultured soil bacterium RepID=L0MN45_9BACT
PndS {ECO:0000313|EMBL:AGB85072.1}; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
pyridine nucleotide-disulfide oxidoreductase
Displaying 10 items

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