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PLM4_65_b1_redo_sep16_scaffold_8137

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8137_1
unknown

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comp(3..410)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8137_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(367..1146)
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CDM66895.1}; EC=4.2.1.100 {ECO:0000313|EMBL:CDM66895.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MQF1_9BACT
PLM4_65_b1_redo_sep16_scaffold_8137_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1279..3228)
DNA (1950bp) protein (650aa)
Peptidase M61 domain protein Tax=Nostoc sp. PCC 7107 RepID=K9QFH7_9NOSO
Predicted protease with the C-terminal PDZ domain {ECO:0000313|EMBL:CDM66894.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M61
PLM4_65_b1_redo_sep16_scaffold_8137_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3529..3990
DNA (462bp) protein (154aa)
Thioredoxin {ECO:0000313|EMBL:CDM66741.1}; EC=1.8.1.8 {ECO:0000313|EMBL:CDM66741.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Thioredoxin M-type, chloroplastic Tax=uncultured Desulfobacterium sp. RepID=E1YAM0_9DELT
thioredoxin
PLM4_65_b1_redo_sep16_scaffold_8137_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4229..4678
DNA (450bp) protein (150aa)
DoxX family protein Tax=Vibrio sp. RC341 RepID=C9QA10_9VIBR
Predicted membrane protein {ECO:0000313|EMBL:CDM66428.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8137_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4819..6087
DNA (1269bp) protein (423aa)
Major facilitator superfamily MFS_1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0D8_9BACT
Arabinose efflux permease family protein {ECO:0000313|EMBL:CDM66427.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
major facilitator superfamily transporter
PLM4_65_b1_redo_sep16_scaffold_8137_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6124..6342)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Saccharomonospora marina XMU15 RepID=H5WYB4_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:CDM66446.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8137_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(6405..7583)
DNA (1179bp) protein (393aa)
Endo-1,4-beta-xylanase-like protein bin=GWD2_Chloroflexi_49_16 species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM4_65_b1_redo_sep16_scaffold_8137_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7777..8358)
DNA (582bp) protein (194aa)
Putative uncharacterized protein Tax=Streptomyces griseoaurantiacus M045 RepID=F3NDG5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CDM66447.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8137_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8425..8838)
DNA (414bp) protein (138aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_8137_11
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(8979..9311)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZJJ1_ANACC
Uncharacterized protein {ECO:0000313|EMBL:KIF32605.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8137_12
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(9308..9535)
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTJ0_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI13847.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
PLM4_65_b1_redo_sep16_scaffold_8137_13
unknown

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comp(9668..10993)
DNA (1326bp) protein (442aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8137_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(11182..11895)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Melioribacter roseus (strain P3M) RepID=I6YV80_MELRP bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying 14 items

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