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PLM4_65_b1_redo_sep16_scaffold_5125

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5125_1
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..438)
DNA (438bp) protein (146aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
Membrane-associated zinc metalloprotease Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q313H3_DESDG
zinc metalloprotease
PLM4_65_b1_redo_sep16_scaffold_5125_2
unknown

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comp(535..750)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5125_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(1110..2879)
DNA (1770bp) protein (590aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NM57_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIF34125.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5125_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3161..4900)
DNA (1740bp) protein (580aa)
TPR repeat Tax=Nitrosospira sp. APG3 RepID=M5DRB5_9PROT
TPR repeat {ECO:0000313|EMBL:CCU61980.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5125_5
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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comp(5064..5525)
DNA (462bp) protein (154aa)
Steroid delta-isomerase Tax=uncultured candidate division OP1 bacterium RepID=H5SRW2_9BACT
Steroid delta-isomerase {ECO:0000313|EMBL:BAL57382.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5125_6
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5724..6461)
DNA (738bp) protein (246aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000349B512
protein-L-isoaspartate O-methyltransferase
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_65_b1_redo_sep16_scaffold_5125_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6526..7914)
DNA (1389bp) protein (463aa)
Amino acid transporter Tax=Microcoleus sp. PCC 7113 RepID=K9WLW4_9CYAN
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AFZ20796.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM4_65_b1_redo_sep16_scaffold_5125_8
unknown

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comp(8219..8728)
DNA (510bp) protein (170aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5125_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9348..10631)
DNA (1284bp) protein (428aa)
Tetratricopeptide repeat domain protein Tax=uncultured Acidobacteria bacterium RepID=H5S9E7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM65754.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5125_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(10941..11888)
DNA (948bp) protein (316aa)
Membrane protease subunit, stomatin/prohibitin Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D831_DESAJ
membrane protease subunit, stomatin/prohibitin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_5125_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12004..12384)
DNA (381bp) protein (127aa)
Transcriptional regulator, GntR family bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_5125_12
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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12734..12889
DNA (156bp) protein (52aa)
Putative phage protein Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8DDM2_THETY
Putative phage protein {ECO:0000313|EMBL:EMT38137.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter thermohydrosulfuricus WC1.;"
putative terminase large subunit
PLM4_65_b1_redo_sep16_scaffold_5125_13
unknown

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13084..13212
DNA (129bp) protein (43aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5125_trna_1
unknown

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comp(13305..13377)
DNA (73bp)
transferRNA Lys
PLM4_65_b1_redo_sep16_scaffold_5125_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13547..13858)
DNA (312bp) protein (104aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK04_CHLTF
Displaying 15 items

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