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PLM4_65_b1_redo_sep16_scaffold_5836

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5836_1
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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3..518
DNA (516bp) protein (172aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYV9_MAHA5
amino acid ABC transporter ATP-binding protein
Tax=RBG_16_Zixibacteria_50_21_curated
PLM4_65_b1_redo_sep16_scaffold_5836_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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686..1390
DNA (705bp) protein (235aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HAAT family amino acid/amide ABC transporter ATP-binding protein 2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_5836_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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1380..2693
DNA (1314bp) protein (438aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE14_CHLTF
HAAT family amino acid/amide ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_5836_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(2677..2976)
DNA (300bp) protein (100aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_5836_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3350..4732)
DNA (1383bp) protein (461aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Argininosuccinate lyase Tax=Thiocapsa marina 5811 RepID=F9UE14_9GAMM
argininosuccinate lyase
PLM4_65_b1_redo_sep16_scaffold_5836_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4788..5249
DNA (462bp) protein (154aa)
Arginine repressor Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WTC2_9NOCA
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transcriptional regulator, ArgR family
PLM4_65_b1_redo_sep16_scaffold_5836_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5380..6612
DNA (1233bp) protein (411aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
argininosuccinate synthase (EC:6.3.4.5)
PLM4_65_b1_redo_sep16_scaffold_5836_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6736..7797
DNA (1062bp) protein (354aa)
Uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJF7_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:CDM65487.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5836_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7988..9028
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.-)
N-acetyl-gamma-glutamyl-phosphate reductase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKD4_CHLTF
PLM4_65_b1_redo_sep16_scaffold_5836_10
unknown

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9025..9168
DNA (144bp) protein (48aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5836_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9175..10362
DNA (1188bp) protein (396aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Acetylornithine aminotransferase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH56_RHOM4
class III aminotransferase
PLM4_65_b1_redo_sep16_scaffold_5836_12
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

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10302..10685
DNA (384bp) protein (128aa)
Putative uncharacterized protein Tax=gamma proteobacterium IMCC2047 RepID=F3KF82_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGG98972.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5836_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10768..11799
DNA (1032bp) protein (344aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:CDM65490.1}; EC=2.1.3.9 {ECO:0000313|EMBL:CDM65490.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ornithine carbamoyltransferase Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L3H6_FRAAD
ornithine carbamoyltransferase
PLM4_65_b1_redo_sep16_scaffold_5836_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11928..12836
DNA (909bp) protein (303aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKD6_CHLTF
PLM4_65_b1_redo_sep16_scaffold_5836_15
unknown

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comp(12726..12962)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 15 items

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