name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM4_65_b1_redo_sep16_scaffold_1794_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(1..543)
|
Integral membrane protein Rhomboid family protein Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJM0_9BACT
Uncharacterized membrane protein {ECO:0000313|EMBL:CDM65786.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_2
uncultured bacterium, Bacteria
|
Not on your lists |
comp(1059..1775)
|
Uncharacterized protein Tax=uncultured bacterium RepID=K2BBF1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD70876.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phospholipase C/P1 nuclease domain-containing protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2110..2676)
|
Ferritin Dps family protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVX9_NITHN
Bacterioferritin {ECO:0000313|EMBL:ETX06734.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ferritin
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(2804..4762)
|
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IJZ4_9PLAN
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:CDM65785.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Thiol-disulfide isomerase / thioredoxin
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(4982..5350)
|
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
alkylhydroperoxidase Tax=Arenimonas oryziterrae RepID=UPI0003B6D795
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
5647..6150
|
Chemotaxis protein CheW Tax=Rhizobium tropici CIAT 899 RepID=L0LS48_RHITR
Chemotaxis signal transduction protein {ECO:0000313|EMBL:CDM65783.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
chemotaxis protein CheW
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
6378..8954
|
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Endonuclease MutS2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGJ6_CHLTF
MutS2 family protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
8966..10792
|
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA primase catalytic subunit (EC:2.7.7.-)
DNA primase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHR3_CHLTF
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
10893..12641
|
RNA polymerase sigma70 factor Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000374241F
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sigma 38, RpoS
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(12718..13101)
|
Uncharacterized protein {ECO:0000313|EMBL:CDM64691.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(13105..14259)
|
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFA7_CHLTF
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(14815..16185)
|
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037E92FF
phosphoglucosamine mutase
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(16215..17024)
|
YbbR-like protein {ECO:0000313|EMBL:CDM66576.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
YbbR family protein bin=GWC2_Methylomirabilis_70_16 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(17103..17963)
|
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEP6_CHLTF
TIGR00159 family protein {ECO:0000313|EMBL:CDM66575.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_15
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
comp(18058..19005)
|
Cation diffusion facilitator family transporter Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J2M5_NOSP7
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACC80456.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_16
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(19193..20260)
|
Peptidase M50 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5W5_RHOVT
Peptidase M50 family protein {ECO:0000313|EMBL:GAN34806.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
peptidase M50
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_17
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria
|
Not on your lists |
comp(20456..22138)
|
Adenylate cyclase, family 3 (Some proteins contain HAMP domain) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLM0_CHLTF
adenylate cyclase
Adenylate cyclase, family 3 (Some proteins contain HAMP domain) {ECO:0000313|EMBL:AEP13816.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria
|
Not on your lists |
22414..24090
|
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_19
unknown
|
Not on your lists |
24174..25901
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_1794_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
26295..26840
|
Transcriptional regulator, CarD like protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG97_CHLTF
Transcriptional regulator, CarD family {ECO:0000313|EMBL:CDM65831.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transcriptional regulator, CarD like protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
27111..28469
|
CBS domain-containing protein {ECO:0000313|EMBL:CDM65614.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein bin=GWF2_Geobacter_54_21 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_22
uncultured bacterium, Bacteria
|
Not on your lists |
28572..29924
|
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
enolase (EC:4.2.1.11)
Enolase Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGM7_TERRK
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
29942..30427
|
GCN5-related N-acetyltransferase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EEY7_RUNSL
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEI48598.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
30449..31999
|
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LD76_THEPS
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
32055..33083
|
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:CDM65824.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipopolysaccharide heptosyltransferase II
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
33184..34188
|
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family {ECO:0000313|EMBL:CDM66825.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CDM66825.1};; EC=3.4.21.- {ECO:0000313|EMBL:CDM66825.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEX5_CHLTF
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria
|
Not on your lists |
34185..34793
|
D-Ala-D-Ala carboxypeptidase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II05_KORVE
D-alanyl-D-alanine carboxypeptidase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
34956..36092
|
TonB family C-terminal domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE2_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM65823.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB family C-terminal domain-containing protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
36173..37129
|
Roadblock/LC7 domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEW4_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM65822.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Roadblock/LC7 domain-containing protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1794_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(37210..38424)
|
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
|