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PLM4_65_b1_redo_sep16_scaffold_2909

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2909_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(1..273)
DNA (273bp) protein (91aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2909_2
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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467..1069
DNA (603bp) protein (201aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJY6_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK17738.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM4_65_b1_redo_sep16_scaffold_2909_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1066..1272
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M7T1_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK10448.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
PLM4_65_b1_redo_sep16_scaffold_2909_4
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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1293..1652
DNA (360bp) protein (120aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00037D4161
hypothetical protein
Glr2663 protein {ECO:0000313|EMBL:BAC90604.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM4_65_b1_redo_sep16_scaffold_2909_5
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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comp(1915..3651)
DNA (1737bp) protein (579aa)
Serine/threonine protein kinase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
protein kinase
Tax=RBG_16_Zixibacteria_43_9_curated
PLM4_65_b1_redo_sep16_scaffold_2909_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3774..4298
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH97_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98838.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PLM4_65_b1_redo_sep16_scaffold_2909_7
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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4371..4826
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ14_OPITP
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM4_65_b1_redo_sep16_scaffold_2909_8
unknown

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4843..4992
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2909_9

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comp(5471..6484)
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B39FCA
Marine sediment metagenome DNA, contig: S01H1_C00193 {ECO:0000313|EMBL:GAF73432.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_2909_10
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6526..6732)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Indibacter alkaliphilus LW1 RepID=S2DBS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EOZ96627.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2909_11
unknown

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6986..7180
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2909_12
unknown

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7406..7588
DNA (183bp) protein (61aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2909_13
unknown

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7746..7976
DNA (231bp) protein (77aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2909_14
unknown

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comp(7986..8498)
DNA (513bp) protein (171aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2909_trna_1
unknown

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8013..8092
DNA (80bp)
transferRNA Trp
PLM4_65_b1_redo_sep16_scaffold_2909_trna_2
unknown

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8156..8239
DNA (84bp)
transferRNA Ser
PLM4_65_b1_redo_sep16_scaffold_2909_trna_3
unknown

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8340..8414
DNA (75bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_2909_trna_4
unknown

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8523..8597
DNA (75bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_2909_trna_5
unknown

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8608..8684
DNA (77bp)
transferRNA Glu
PLM4_65_b1_redo_sep16_scaffold_2909_15
unknown

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comp(8666..9133)
DNA (468bp) protein (156aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2909_trna_6
unknown

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8746..8818
DNA (73bp)
transferRNA His
PLM4_65_b1_redo_sep16_scaffold_2909_trna_7
unknown

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8949..9020
DNA (72bp)
transferRNA Asp
PLM4_65_b1_redo_sep16_scaffold_2909_trna_8
unknown

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9025..9099
DNA (75bp)
transferRNA Lys
PLM4_65_b1_redo_sep16_scaffold_2909_trna_9
unknown

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9110..9180
DNA (71bp)
transferRNA Pro
PLM4_65_b1_redo_sep16_scaffold_2909_trna_10
unknown

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9326..9398
DNA (73bp)
transferRNA Arg
PLM4_65_b1_redo_sep16_scaffold_2909_trna_11
unknown

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9409..9480
DNA (72bp)
transferRNA Gly
PLM4_65_b1_redo_sep16_scaffold_2909_trna_12
unknown

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9614..9685
DNA (72bp)
transferRNA Cys
PLM4_65_b1_redo_sep16_scaffold_2909_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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9832..10413
DNA (582bp) protein (194aa)
Restriction endonuclease Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLF8_CHLTF
Restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AEP13433.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_2909_trna_13
unknown

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10631..10702
DNA (72bp)
transferRNA Phe
PLM4_65_b1_redo_sep16_scaffold_2909_17
unknown

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comp(10651..10776)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

View Taxonomy