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PLM4_65_b1_redo_sep16_scaffold_13785

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_13785_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2..1252)
DNA (1251bp) protein (417aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Lon-A peptidase (EC:3.4.21.53)
Lon protease Tax=Solibacter usitatus (strain Ellin6076) RepID=LON_SOLUE
PLM4_65_b1_redo_sep16_scaffold_13785_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1410..2654)
DNA (1245bp) protein (415aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJR5_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
PLM4_65_b1_redo_sep16_scaffold_13785_3
unknown

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comp(2693..2914)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_13785_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2940..3524)
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDX1_CHLTF
PLM4_65_b1_redo_sep16_scaffold_13785_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3633..4967)
DNA (1335bp) protein (445aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381A0DF
trigger factor
PLM4_65_b1_redo_sep16_scaffold_13785_trna_1
unknown

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comp(5130..5211)
DNA (82bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_13785_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5506..5763)
DNA (258bp) protein (86aa)
Bacterial regulatory s, gntR family protein Tax=Clostridium sordellii RepID=T0CRH7_CLOSO
GntR-family transcriptional regulator {ECO:0000313|EMBL:CEN90409.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
transcriptional regulator with HTH domain and aminotransferase domain
PLM4_65_b1_redo_sep16_scaffold_13785_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5824..6858)
DNA (1035bp) protein (345aa)
Glutamine--fructose-6-phosphate transaminase {ECO:0000313|EMBL:CDM64600.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CDM64600.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate transaminase (Isomerizing) Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028G3_SOLUE
PLM4_65_b1_redo_sep16_scaffold_13785_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7093..8292
DNA (1200bp) protein (400aa)
Glycosyl hydrolase, family 20, catalytic domain protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7Z3_ACIC5
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:CDM64596.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glycoside hydrolase, family 20, catalytic core
Displaying 9 items

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