ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_7642

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7642_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3..1289)
DNA (1287bp) protein (429aa)
FAD linked oxidase domain protein Tax=Geobacillus RepID=D7D784_GEOSC
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:CDM64313.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FAD linked oxidase
PLM4_65_b1_redo_sep16_scaffold_7642_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1820..3556
DNA (1737bp) protein (579aa)
Amidohydrolase 3 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL06_KORVE
Predicted TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:CDM64314.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amidohydrolase 3
PLM4_65_b1_redo_sep16_scaffold_7642_3
unknown

Not on your lists

comp(3679..4122)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7642_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4135..5457)
DNA (1323bp) protein (441aa)
Amino acid permease-associated region Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJW3_SPILD
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM64315.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amino acid permease-associated protein
PLM4_65_b1_redo_sep16_scaffold_7642_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5524..6489
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHB2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60747.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_7642_6
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

6652..7527
DNA (876bp) protein (292aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003796C89
Phytanoyl-CoA dioxygenase
Tax=CG_Arma_01
PLM4_65_b1_redo_sep16_scaffold_7642_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7948..8433
DNA (486bp) protein (162aa)
Biopolymer transport protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE5_CHLTF
Biopolymer transport protein {ECO:0000313|EMBL:CDM64998.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
biopolymer transport protein
PLM4_65_b1_redo_sep16_scaffold_7642_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8901..9956
DNA (1056bp) protein (352aa)
TPR repeat-containing protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
peptidase S1 and S6 chymotrypsin/Hap
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_65_b1_redo_sep16_scaffold_7642_9
Rasamsonia emersonii, Rasamsonia, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

10442..11026
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Neisseria wadsworthii 9715 RepID=G4CQV0_9NEIS
RNA splicing factor (Pad-1) {ECO:0000313|EMBL:KKA24107.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Rasamsonia.;" source="Rasamsonia emersonii CBS 393.64.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_7642_10
unknown

Not on your lists

11196..11279
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 10 items

View Taxonomy