ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_49558

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_49558_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

595..1137
DNA (543bp) protein (181aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036A7666
Protein of unknown function DUF3224
Uncharacterized protein {ECO:0000313|EMBL:AHG89173.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_49558_2
unknown

Not on your lists

1228..1407
DNA (180bp) protein (60aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_49558_3
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1413..2060
DNA (648bp) protein (216aa)
MOSC domain containing protein Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J6B2_NOSP7
MOSC domain-containing protein
MOSC domain containing protein {ECO:0000313|EMBL:ACC80812.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
PLM4_65_b1_redo_sep16_scaffold_49558_4
unknown

Not on your lists

2087..2854
DNA (768bp) protein (256aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_49558_5
Anolis carolinensis, Anolis, Squamata, Chordata, Metazoa

Not on your lists

comp(3006..3725)
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Anolis carolinensis RepID=H9G9B0_ANOCA
Uncharacterized protein {ECO:0000313|Ensembl:ENSACAP00000004524}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Iguanidae; Polychrotinae; Anolis.;" source="Anolis carolinensis (Green anole) (American chameleon).;"
peptidase S51 dipeptidase E
PLM4_65_b1_redo_sep16_scaffold_49558_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3806..4054)
DNA (249bp) protein (83aa)
multidrug MFS transporter Tax=Rhizobium leguminosarum RepID=UPI000371E58A
Uncharacterized protein {ECO:0000313|EMBL:ETX00848.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Epoxide hydrolase domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_49558_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4099..4941)
DNA (843bp) protein (281aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003737E08
Multidrug MFS transporter {ECO:0000313|EMBL:ETX05518.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Epoxide hydrolase domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_49558_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5246..5842)
DNA (597bp) protein (199aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CCW36527.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
3-isopropylmalate dehydratase small subunit Tax=Chthonomonas calidirosea T49 RepID=S0EZR4_9BACT
PLM4_65_b1_redo_sep16_scaffold_49558_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5849..7255)
DNA (1407bp) protein (469aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase large subunit Tax=Chthonomonas calidirosea T49 RepID=S0F054_9BACT
PLM4_65_b1_redo_sep16_scaffold_49558_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7466..8182)
DNA (717bp) protein (239aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|SAAS:SAAS00089855}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|SAAS:SAAS00089855};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F701_ACIC5
Displaying 10 items

View Taxonomy