ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_1417_28

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(26940..27578)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:CDM67070.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 212.0
  • Bit_score: 260
  • Evalue 1.50e-66
LemA family protein; K03744 LemA protein bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 195.0
  • Bit_score: 181
  • Evalue 8.50e-43
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 209.0
  • Bit_score: 170
  • Evalue 3.30e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGACTCGACGAAGACTATTGTTACTGGCTTTGCTTATCATCACGGCAGCGATCGCCAGCGGCTGCAGCTATAACACCCTGACGACAAAGCACGAGACCGTGAAGGCCAAGTGGTCAAACGTGGAAGTTAATCTGCAACGTCGTTCTGATCTGCTGAATAATCTAATTGAAACGGCCAAACTTGCAGGCGTGCAAGAGCAGGAAGTTTTCGGGAAGATTGCCGAAGCGCGATCCAGGCTGCTGAATGCTACGCAACAAGCGCCGCAGGGTGAAGGTGGCGACAAGACTCCGGAACAGAAACAGGCGGTGATTGACGCAGCCAACAGTTTTGGCGGCACGATTGGCCGCCTGCTCGTCTTGCAGGAGCAGTATCCCCAATTGAAGTCTAACGAGAATTTCATGAAGGCGCAGGATGAGGTAGTGGGAACCGAGAACCGGATCGCGATAGCGCGCAGGGATTACAACGAAGCGGTGCAGGACTACAACACCACTCGCGCACGCTTTCCCGCTGTGATTTCCGCAAAGCTGTTCGGCTTCAAGGAAGAGCCTTACTTCAAGGCTGAAGAGGGCGCCACGCAGGTGCCAAAGATCGATGCAAATACCTTGCGCCAGAATCCAAATGCCAATCAGCAAAAGTGA
PROTEIN sequence
Length: 213
MTRRRLLLLALLIITAAIASGCSYNTLTTKHETVKAKWSNVEVNLQRRSDLLNNLIETAKLAGVQEQEVFGKIAEARSRLLNATQQAPQGEGGDKTPEQKQAVIDAANSFGGTIGRLLVLQEQYPQLKSNENFMKAQDEVVGTENRIAIARRDYNEAVQDYNTTRARFPAVISAKLFGFKEEPYFKAEEGATQVPKIDANTLRQNPNANQQK*