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PLM4_65_b1_redo_sep16_scaffold_3149_20

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(19975..21333)

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 452.0
  • Bit_score: 609
  • Evalue 2.90e-171
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] bin=CNBR_ACIDO species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 452.0
  • Bit_score: 496
  • Evalue 1.50e-137
hisS; histidyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 461.0
  • Bit_score: 453
  • Evalue 5.40e-125

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGCGCGATTTTCTGCCTGCGGACGTGCGGCGGCGCGAATACGTCATCGGCGTCATTAAGGAAGTGTATGAACGATATGGCTTCGAGCCCCTCGAAACTCCGGCGGTGGAGAATATCGAAACGCTGATGGGAAAGTATGGAGAGGAAGGGAATCAACTCATCTTCAAAATACTTAAGCGCGGTGTGCATGAAAGTACGGGCGAGGCGGACCTCGCATTGCGATACGATTTAACGGTGCCACTTGCGCGAGTGGTGGCTGAGTATCGCGGCCTGCTGCCAAAATTTTTCAAGCGCTACCAAATTCAACCAGTATGGCGAGCGGACCGTCCGGCGCGTGGTAGGTTTCGCGAATTTTACCAGTGTGACGTTGACATCCTTGGGTCTCGCTCAATGCTGGTCGAGGCTGAGATTTGCGCCGCTGCGAGTGAGGTGTTAGTGAAGCTTGGATTTGATGATTTCTCAATTAGACTAAATCACCGAAACGTTCTAACCGGCGTGCTGCAAGCGGCGGGAGTAGCCTTTGAGAAACACGAGGTCGCGTTAGTAGCCCTGGACAAGTTTGACAAGATCGGCAGGTCGGGGGTCGAGAAGGAGTTTGCCGAGCGAGCAATTGGCAGTGCGTCCGGCACTTCTTTGCTCAACTTCTTTGGCGAGTTGAATTCGCTTGATCATGCGGCGGAAATAGCCGTGAGTGAAGACCCCGGGCAGAAACGAAAGGCTCTGAATGCCGCGATTCTGGGACGCCTGGTGGAGTTCGTTGGCGATAATGAGCTGGGCGCGCGAGGCGTCGATGAACTTAGCGCGATTATGAAGTTTGCGGAAGCCGAAGGCATCGCTGCGAGAGTTGAGATCGATCCGACGCTTGCCCGTGGACTGTCCTATTACACGGGCGCGATTATGGAGATTAATGTGAAAGACCTTCCGGGTAGTCTGGGTGGCGGCGGCCGTTACGATAATCTCGTCGGTATGTTCCTCGGTGAAGACGTTCCTGCGTGTGGTTTCTCGCTGGGACTTGAACGCATCATTGTAGTGATGACCGAGCGAGAGATGTTTCCTCACGCGGTGGTAGCGACACCGGCGGACATAATGATAAGCATTTGGAATGAAGAATCCATCCTGGAATCAATCGCACTGGCTAATCAGTTGCGAAGCGAGGGACTACGGGTAGATTTGTATCCGGAAGCCGACAAGCTCGGGAAACAGTTCAAGTATGCCTCGTCTCGTGGAATACCTTTTGTCGCCATTGTCGGTGATGTTGAACGAGTGCGAGGCGAGGTCGCCATTAAGGACTTACGATCAGGGGAACAGCTAAGCCTGAAACGCGAACACGTCACGATGGAACTCCGGCGAGTGTTGTAG
PROTEIN sequence
Length: 453
MRDFLPADVRRREYVIGVIKEVYERYGFEPLETPAVENIETLMGKYGEEGNQLIFKILKRGVHESTGEADLALRYDLTVPLARVVAEYRGLLPKFFKRYQIQPVWRADRPARGRFREFYQCDVDILGSRSMLVEAEICAAASEVLVKLGFDDFSIRLNHRNVLTGVLQAAGVAFEKHEVALVALDKFDKIGRSGVEKEFAERAIGSASGTSLLNFFGELNSLDHAAEIAVSEDPGQKRKALNAAILGRLVEFVGDNELGARGVDELSAIMKFAEAEGIAARVEIDPTLARGLSYYTGAIMEINVKDLPGSLGGGGRYDNLVGMFLGEDVPACGFSLGLERIIVVMTEREMFPHAVVATPADIMISIWNEESILESIALANQLRSEGLRVDLYPEADKLGKQFKYASSRGIPFVAIVGDVERVRGEVAIKDLRSGEQLSLKREHVTMELRRVL*